Gene YpsIP31758_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2368 
Symbol 
ID5388006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2668474 
End bp2669448 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID640865357 
ProductPTS system mannose/fructose/sorbose family IIB subunit 
Protein accessionYP_001401337 
Protein GI153950698 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.15235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATAG CTATTATCAT CGGCACACAT GGGGCTGCGG CAGAACAACT GCTTAAAACA 
GCTGAAATGA TTTTAGGTGA ACAGAGTAAT GTTGCTTATA TCGATTTCGT CCCAGGTGAA 
AATGCTGAAA CGTTGATTGA GAAGTACAAC GATAGATTGA CCGGGCTAGA TACCAGTAAA 
GGTGTTCTAT TCTTGGTCGA TACTTGGGGT GGTAGCCCGT TTAATGCCGC CAGTCGCATT 
GTTATCGATA AAGAGAACTA TGAGGTCGTC ACTGGCGTTA ACATTCCGAT GCTGGCTGAA 
ACCTTTATGG CTCGTGATGA TGAGCCGTCA TTCGCTGAAT TGGTTGCAGT AGCTGTCGAG 
ACCGGCCGCG AGGGTGTGAA AGCCTTAAAA GCGCCTGATG TTAAAAGTGA TAAGCCCGAG 
ACACAACCCG CAGCTCCAGT GCCAACAGCC AAGGCTCCTG CCGTTGCTTT AGGTCCGAAC 
GATCATATGA AGATCGGGCT GGCACGTATT GATGACCGCT TAATCCATGG ACAGGTTGCG 
ACCCGTTGGA CCAAAGAAAC TAACGTAAAC CGCATTATTG TAGTCAGTGA TGAAGTTGCT 
GCCGACAAAA TGCGTAAAAC CTTGCTAACG CAAGTTGCCC CTCCCGGTGT TACCGCACAC 
GTGGTTGATG TAGAAAAAGC GATTCGCGTT TATAACAACC CGAAATATGC CAATGATAGG 
GTCATGCTGC TCTTTACCAA CCCGACTGAC GTTGTTCGTC TGGTTGAGGG CGGTGTAGAC 
ATTAAATCAG TCAATATTGG TGGTATGGCA TTCCGTCAGG GGAAAACCCA GGTGAACAAT 
GCCGTCTCCA TTGATGAAAA AGATATTGAA GCGTTTAACA AATTGAATGC TCGCGGTATT 
GAATTGGAAG TCCGAAAAGT GTCTTCGGAT AGCCGGCTCA AAATGATGGA TTTGATTAGT 
AAATTAAATA AATAG
 
Protein sequence
MSIAIIIGTH GAAAEQLLKT AEMILGEQSN VAYIDFVPGE NAETLIEKYN DRLTGLDTSK 
GVLFLVDTWG GSPFNAASRI VIDKENYEVV TGVNIPMLAE TFMARDDEPS FAELVAVAVE 
TGREGVKALK APDVKSDKPE TQPAAPVPTA KAPAVALGPN DHMKIGLARI DDRLIHGQVA 
TRWTKETNVN RIIVVSDEVA ADKMRKTLLT QVAPPGVTAH VVDVEKAIRV YNNPKYANDR 
VMLLFTNPTD VVRLVEGGVD IKSVNIGGMA FRQGKTQVNN AVSIDEKDIE AFNKLNARGI 
ELEVRKVSSD SRLKMMDLIS KLNK