Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2283 |
Symbol | fliD |
ID | 5386229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2586154 |
End bp | 2587554 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865270 |
Product | flagellar capping protein |
Protein accession | YP_001401252 |
Protein GI | 153948368 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.733506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTA TCAGTGCATT AGGTACCGGT TCAGGGATGG ATTTAAACAC ACTGCTGTCA CAATTATCGG CCGCAGAACA AACACGCCTT ACCCCGCTAA CCACACAGCA GACCAGTTAT AAAGGTAAAC TTACCGCTTA TGGTGTTTTG CAAAGTGCGT TGGCAAAACT TGAAACCGCG TCTACCGCCC TGAAAAAAGC TGACACGTTG AATTCTACGG CAGTCAGCGG CAGCAATTCC GCATTCAGCG CGACAACGGA TAGTGCGGCC AGTGCAGGTA CGTACAGTAT TGAAGTCACC AATCTGGCCA AAGCACAATC GCTGTTATCG ACAGATGTGC CTAGCGCTAC AGATAAATTG GGTAGCAGTG ATGCAACACG CACAATCACG ATTGCTCAAC CCGGCCAAAA AGAGCCGATG AAAATCAGCC TGACCAGCGA GCAAACTTCG CTGACGGGTA TCCGTGATGC TATTAATAAG CAGGAAGGCA GTGTCAACGC CAGTATTATG AAAGCAGATG ATAATACTTA TTATCTGGCA TTAACGTCGA AGGATACCGG TACGCAATCA GAAATGACCA TCAGTGTAGC GGGTGATGAA ACCTTAAATA ATTTCCTGAA CTATACCCCC AGCAGCACCG GCGGTAGTGG TGCGCTGACG CAAAAAGTCA AAGCGGAAGA CGCCACCTTG AGTGTTAATG GTGTCAGTAT TACCCGCCAA AGTAATACCA TTACCGATGC ACCTCAGGGC GTCACCATCA ATCTGAAAGC CGTCACCAAA GAGGGCGCGC CAGAGCAACT GACTATTGTC CGTGACAACA CAGCCACAAA GGCGGCGATC CAAAGTTTTG TCGATGCCTA TAACTCATTA CAAACCACCT TCGGCTCACT GACCAAATAT ACCGTGGTAG AGACAGGTCA AGATCAATCC ACGAGTAATG GTGCATTAGT TGGGGATGGC ACATTGCGCT CTATCCAGAC GCAATTAAAG AGCCAATTGG CCTCTAGTCA ATCTGGGGAT TTGAAAACCT TAGCCAGCAT CGGGATCACG CAAGATCTCG ACGGTAAGTT GGTTATCGAC GCCGATAAAT TAAATACTGC ACTCACCGAT AAACCCAATA GCGTCACTGC ATTTTTTGTG GGTGATGGGG AAACCACTGG TTTTGCTACT CAGACTGAAA AGTTGCTCAA TACCGCATTG GATACGACAT TAGGGACATT AAAAACAGCC ACTGACGGTA TTAATACTTC ACTAAAAAAC CTGGATAAAC AAATTGCGGC AACGACTGCC AGTATAGAAA CAGCCATTGA GCGCTATAAA ACACAATTTA CTCAATTGGA TAAGCTGATG ACATCAATGA ACAGTACAGC CAGTTTCTTA ACACAACAAT TTGAATCATA A
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Protein sequence | MASISALGTG SGMDLNTLLS QLSAAEQTRL TPLTTQQTSY KGKLTAYGVL QSALAKLETA STALKKADTL NSTAVSGSNS AFSATTDSAA SAGTYSIEVT NLAKAQSLLS TDVPSATDKL GSSDATRTIT IAQPGQKEPM KISLTSEQTS LTGIRDAINK QEGSVNASIM KADDNTYYLA LTSKDTGTQS EMTISVAGDE TLNNFLNYTP SSTGGSGALT QKVKAEDATL SVNGVSITRQ SNTITDAPQG VTINLKAVTK EGAPEQLTIV RDNTATKAAI QSFVDAYNSL QTTFGSLTKY TVVETGQDQS TSNGALVGDG TLRSIQTQLK SQLASSQSGD LKTLASIGIT QDLDGKLVID ADKLNTALTD KPNSVTAFFV GDGETTGFAT QTEKLLNTAL DTTLGTLKTA TDGINTSLKN LDKQIAATTA SIETAIERYK TQFTQLDKLM TSMNSTASFL TQQFES
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