Gene YpsIP31758_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2253 
SymboluvrY 
ID5388513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2559983 
End bp2560639 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640865239 
Productresponse regulator 
Protein accessionYP_001401222 
Protein GI153947332 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00000726498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCAGCG TTCTTCTTGT TGATGACCAC GAATTGGTGC GCGCAGGGAT ACGACGCATT 
CTTGACGACA TCAAAGGTAT CAAAGTCGCG GGTGAGATGC AGTGTGGTGA AGATGCGGTC
AAATGGTGCC GTAGCCATGT TGTAGATATC GTCCTGATGG ATATGAATAT GCCCGGTATT
GGCGGGTTGG AAGCAACACG TAAAATTTTA CGTTTTTCGC CGGATACTAA AGTTATAATG
CTAACCATTC ATACGGAGAA TCCATTACCG GCAAAGGTCA TGCAAGCGGG GGCGGGGGGG
TATCTCAGTA AAGGAGCTGC TCCGCAGGAT GTTATAACCG CCATCCGTAT GGTACATGCT
GGGCAACGTT ACATAGCTTC TGATATTGCA CAACAAATGG CACTGAGCCA GCTTGAGCCT
CCAGCAGAAA CACCTTTTAG CTGTTTGTCG GAGCGTGAGT TGCAAATAAT GATAATGATA
ACGAAAGGCC AAAAGGTGAA TGAGATCTCA GAACAGCTTC ATCTGAGTCC GAAAACGGTT
AATAGTTATC GCTACCGTAT GTTCAGTAAA CTCAATATTA GTGGTGACGT TGAATTAACC
CATTTGGCTA TTCGCCACGG TTTATTTAAT GCGGAGACGT TATCAAATAG TGACTGA
 
Protein sequence
MISVLLVDDH ELVRAGIRRI LDDIKGIKVA GEMQCGEDAV KWCRSHVVDI VLMDMNMPGI 
GGLEATRKIL RFSPDTKVIM LTIHTENPLP AKVMQAGAGG YLSKGAAPQD VITAIRMVHA
GQRYIASDIA QQMALSQLEP PAETPFSCLS ERELQIMIMI TKGQKVNEIS EQLHLSPKTV
NSYRYRMFSK LNISGDVELT HLAIRHGLFN AETLSNSD