Gene YpsIP31758_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2250 
Symbol 
ID5385059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2555953 
End bp2556969 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640865233 
Productphage integrase family site specific recombinase 
Protein accessionYP_001401219 
Protein GI153949027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.15088e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTA AACGTAAAAA ACCCAAGGAC ACTGACTTAC CTCCCCGTGT TTATCGCGGT 
AAATCAAAAT ATGAATTTCA TCCTGCACGG GGCGGATCAA TATCTCTCTG TCCGTTGGAT
GCCCCTATTT CACAGGTGTG GTCAGACTAC GAAAAGGTCA ATGACAGGCT TCCAGAGAAA
GTCACATTAA ATAAACTTAC TGAGCAGTTT CTTCACTCCA TGGATTTCTG TGAGTTAGCT
ATTGAGACAC AGAAAGATTA CCGGAAATAC TCACTCAAAT TGCTGCCAGT CTTTGGAGAA
ATGTCCCCTG ACAATATAAG ACCCGAACAT ATAAGAAAGT ATATGGATAA ACGAGGAATA
ACGAGCAGAA CGCAGGCTAA CCGGGAAAAA ACTTTCCTTT CTCGCGTTTA TCGCTGGGGA
TATGAACGCG GAATGGTGAA AGGCAATCCA TGCAGAGGGG TCAAGCAATT TACGGAGAAA
GCCAGAGACC GCTATATTAC AGATGAGGAA TACGACGCAG TGTATCAAGT CGCACCTGAT
GTTGTCCGAG TTGCAATGGA AATAGCCTAT CTGTGTCTCG CCCGGCAAGC GGATGTCCTT
GCTTTGCGTC GTGATCAGCT CAGAGAACCC GGGATCTATA TCAAACAGGG TAAGACGGCA
GCCAGGCAGA TTAAAGCATG GTCTGAACGG TTACGTGATG CCATAACACT GGCTGAGTCC
CTTCCCCTGA AGTCAGGTAT AAGTAGTGTG TATATCATCC ATCAACGTAC AGGTTTACGG
TATACGCGTG ATGGATTTAA TAGTAAATGG CGCAAAGCCA GGGAAGTCGC AAAAAAAACA
TATCCAGAGT TGGATTTTAA TTTCACCTTC CATGACCTGA AGGCTAAAGG TGTTTCTGAT
CTTGAAGGGA CACTCAGTGA AAAACAGGCA ATTTCAGGGC ATAAAAACAT GGGGCAAACG
GCACGATATG ATCGGAAAAT AAAAATTGTG CCGGTAGTCG GTAATCAAAA AAAGTGA
 
Protein sequence
MAGKRKKPKD TDLPPRVYRG KSKYEFHPAR GGSISLCPLD APISQVWSDY EKVNDRLPEK 
VTLNKLTEQF LHSMDFCELA IETQKDYRKY SLKLLPVFGE MSPDNIRPEH IRKYMDKRGI
TSRTQANREK TFLSRVYRWG YERGMVKGNP CRGVKQFTEK ARDRYITDEE YDAVYQVAPD
VVRVAMEIAY LCLARQADVL ALRRDQLREP GIYIKQGKTA ARQIKAWSER LRDAITLAES
LPLKSGISSV YIIHQRTGLR YTRDGFNSKW RKAREVAKKT YPELDFNFTF HDLKAKGVSD
LEGTLSEKQA ISGHKNMGQT ARYDRKIKIV PVVGNQKK