Gene YpsIP31758_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2248 
Symbol 
ID5385185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2554676 
End bp2555386 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID640865231 
Productrepressor protein C2 
Protein accessionYP_001401217 
Protein GI153948175 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000000124176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGC AAACACTTTT CACATCGTTA TCAAGTAACA TTAGTTACAT GAAAACTGAA 
ATGAATGACC GTATCCGTCT TCGCAGACTG CAGTTGGATC TCACTCAACT CCAATTGGCC
AAAGCTATTG GGGTGAGTAG AGTGTCAGTT ACAAAATGGG AGTCAGGAAT AACTAAACCT
GATGGAGAAA ACCTCCATCG GCTTGCACAA ACCCTTTCAT GTACTCCTGA ATGGATTCTC
TACGGAACAG GGGATTTACG TCAGGCTGAT GATACAAATC TCATGCCTGC CACAGTAGTG
CCTACAGCTA TACCTATTAT TTCATCAGTT CAAGCTGGAG TATGGACTGA CACATTTTCC
GCAGTCGGTA TTTCTGATGT GCTGAGATGG TGTAGCACCA CCGTAAAAGT TTCTGATAGC
GCATTTGCAT TAGATGTTCG TGGGGAATCA ATGACAAACC CCAATGGTTT ACCCTCTATA
CCCGAAGGTT CGACTGTTAT TGTTGAACCT AATTATGGTT CTATCGAAGA CTTATACGGC
AAGATAGTAG TCGTTATCAT TGATGGTAGT TCCGAAACTA CAATTAAAAA ATTAGTTGTA
GACGGCCCCA ATAAATATTT GATGCCACTA AATCCGAACT TTAAACCAAT TGAAATCAAA
GGTAACTACC GTATTCTCGG TAAGGTAGTT CAAGTTACTC AAGACTTATA A
 
Protein sequence
MVKQTLFTSL SSNISYMKTE MNDRIRLRRL QLDLTQLQLA KAIGVSRVSV TKWESGITKP 
DGENLHRLAQ TLSCTPEWIL YGTGDLRQAD DTNLMPATVV PTAIPIISSV QAGVWTDTFS
AVGISDVLRW CSTTVKVSDS AFALDVRGES MTNPNGLPSI PEGSTVIVEP NYGSIEDLYG
KIVVVIIDGS SETTIKKLVV DGPNKYLMPL NPNFKPIEIK GNYRILGKVV QVTQDL