| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2167 |
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| Symbol | |
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| ID | 5387175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2493291 |
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| End bp | 2494031 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640865153 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001401140 |
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| Protein GI | 153948481 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.000797941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAC TGAGCCTATT TTTACTGTTA TTCACGATCA GCTATGATGC ACTGGCCGGT
TTGATCGCCG GATCTACCCG CATTATTTAT CAGCCTGAGT TACGTGAGCG CACGCTTATG
CTGGCTAATA CTAATGATTA TCCCGTCGTC GTGCAGACAT GGATTGATAA CGGCGATGTG
GACAGTACGC CGGATCAGGC TAAGGCCCCT TTTATGGTAT TGCCTGCCGT GTTTAAAATG
CAGGCAGGAT CGGTTCAGGC ACTACGCATC ATCAATAAAG GCGAAAATCT TCCCAGTGAC
CGGGAGTCTG TCTATTGGTT GAATTTGTAT GAAATACCGC CCAGAGAACG GAGTAACATT
GATGTTCATG CACAAGTTGC CATGGCAATG AATACACAAA TGAAGATTTT TTATCGACCA
AACGGATTAG CCCCGCCCCC CATCGATGCC ATGGGTAAGA TAAAATTTTC ACTTAAAAAT
ATTGATAATC AATACGTTAT AATCGCGAAT AATCCCACGC CTTATTTTGT CTCTTTTGGC
CAGATTCAGT TACAGAGCCA ACAAAAAAAC TACCTGATTG CACAGTCGAT GGATATGATG
ACCGGCCCAT TCTCCACACG ACCCTATTAT TTTGAACAGC CTCCCACCTC ACTTAAAGGC
AAGTTTACCG TCAGTTATAT TTATTTTGAT GATGCGGGTA ACCAAGTTAA AAACAGCCAG
TCAGTGACGG TAACGCTATA A
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| Protein sequence | MRLLSLFLLL FTISYDALAG LIAGSTRIIY QPELRERTLM LANTNDYPVV VQTWIDNGDV
DSTPDQAKAP FMVLPAVFKM QAGSVQALRI INKGENLPSD RESVYWLNLY EIPPRERSNI
DVHAQVAMAM NTQMKIFYRP NGLAPPPIDA MGKIKFSLKN IDNQYVIIAN NPTPYFVSFG
QIQLQSQQKN YLIAQSMDMM TGPFSTRPYY FEQPPTSLKG KFTVSYIYFD DAGNQVKNSQ
SVTVTL
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