Gene YpsIP31758_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2124 
SymbolchaA 
ID5388295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2441814 
End bp2442914 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID640865110 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_001401097 
Protein GI153949193 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.898006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGC AACATGATCC TGGCCGATCT AAATCTCGCC ACCAAGAATA CTCCCTTATT 
CTACCGATTC TTGCGCTAGT TATTCTTAAC TTCTGGGGCA ATACCAGCAA TTTCGCTGCC 
ATTATTATAA TTAACTTGAT TGCGTTGGTT GGTATTCTGA GCAGTGCTTT CAGTGTCGTG 
CGTCATGCTG ACGTGCTGGC ACACCGCTTG GGTGAACCCT ATGGGTCGTT GATTCTGAGT 
CTGTCGGTGG TGGTACTCGA GGTCAGTCTG ATCTCAGCCA TGATGGCAAC GGGCGATGCG 
GCACCAGCAC TGATGCGCGA TACTCTCTAC TCTATCATTA TGATTGTTAT TGGCGGTTTG 
GTTGGGGTTT CATTGCTGCT GGGTGGGCGT AAATTCGCAA CTCAACACGT TAATCTCGTG 
GGTATCAAAC AATATCTGAT GGCTATCTTC CCGTTGGCGA TAATTGTGTT GGTTTTACCC 
AGCACCCTGC CCGGCGGCAA TTTTACCGTG GCACAATCGT TAGTCGTCGC AGCCATTTCC 
GCAGCAATGT ACGGTGTATT TCTGACAATT CAAACTAAAA CACACCAAAG CTTATTTGTA 
TACGAACATG AAGATGAGGG CGATGACCCA CACCACGGTA AACCCTCTTC TCATAGCAGC 
CTGTGGCATA CCGTCTGGTT ATTGATACAT TTGATCGCCG TGATCGCCGT GACTAAATTT 
GATGCCAACC CGCTGGAAGC CCTATTAACT GAATTAAATG CCCCAGCGAA ATTTACGGGC 
TTCCTGATCG CCCTGCTTAT CCTGTCTCCA GAAGGCTTGG GCGCATTGAA AGCGGTGCTG 
GCAAATCAGG TACAGCGTGC CATGAATTTG TTCTTCGGCT CAGTGCTAGC GACAATTTCC 
CTGACCGTTC CGGCCGTTAC ACTGATCGCC GTGTTAACGG GTCAGGAACT GAATTTCGGG 
CTTGAAGCAC CCCATATTGT GGTGATGGTT AGCGTACTGA TTTTGTCGAA AATATCGTTC 
TCTACGGGCA GAACCAATGT TCTCAACGGT ACCGCCCATC TGGCGCTTTT TGCCGCTTAT 
ATGATGACCA TCATGCTCTA G
 
Protein sequence
MKSQHDPGRS KSRHQEYSLI LPILALVILN FWGNTSNFAA IIIINLIALV GILSSAFSVV 
RHADVLAHRL GEPYGSLILS LSVVVLEVSL ISAMMATGDA APALMRDTLY SIIMIVIGGL 
VGVSLLLGGR KFATQHVNLV GIKQYLMAIF PLAIIVLVLP STLPGGNFTV AQSLVVAAIS 
AAMYGVFLTI QTKTHQSLFV YEHEDEGDDP HHGKPSSHSS LWHTVWLLIH LIAVIAVTKF 
DANPLEALLT ELNAPAKFTG FLIALLILSP EGLGALKAVL ANQVQRAMNL FFGSVLATIS 
LTVPAVTLIA VLTGQELNFG LEAPHIVVMV SVLILSKISF STGRTNVLNG TAHLALFAAY 
MMTIML