Gene YpsIP31758_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2084 
Symbol 
ID5386157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2393996 
End bp2394688 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID640865070 
ProductDNA-binding heavy metal response regulator 
Protein accessionYP_001401057 
Protein GI153947115 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000771382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTAT TGTTGGTAGA AGATGAGGAG AAGACATCTT CGTATATCAA TCGCGCCCTC 
AGCGAGTTGG GCTTTACCGT CGATGTAGCG GCCACCGGGA TCGACGGATT ATATCTGGCT
CTTGAGTATG ATTACGATAC GATTGTGCTC GATGTCATGT TGCCCGGCAT GGATGGTTAC
AGCGTTCTCG AAGGCCTACG CGCCAGCAAA CAAACTCCGG TTCTGATGTT ATCCGCCCGT
GGCTCGGTTG ATGAACGAGT TAAGGGCCTG CGTCACGGTG CCGACGATTA TTTGCCTAAG
CCTTTTTCGC TGATTGAACT GGTTGCGCGT ATCCAGGCGT TGTTGAGGCG GCGTCCCAGT
GATGGTGTAG ATGTCAGCCA ATTGCACATT AATGATCTAC ATCTCGACCT GCTGGCAAGG
CGTGTCACGC GAGCCGGTGA ACGTCTTGAA CTCACCGCCA AAGAGTTCGC CCTGTTAAGC
CTGTTAGCCA GACATCAGGG GGAAATTCTG TCAAAAATGA TGATTGCAGA GCAGGTCTGG
GACATGAATT TTGACAGCGA TGCCAATGTC GTTGAGGTGG CGATAAAACG CCTGCGGGCG
AAAATAGATA CGCCCTACCC GGTCAAACTG CTGCATACAG TGCGAGGCAT GGGGTATGTC
CTTGAAACTC GCCCCGAACG CCAGACTAAA TAG
 
Protein sequence
MRLLLVEDEE KTSSYINRAL SELGFTVDVA ATGIDGLYLA LEYDYDTIVL DVMLPGMDGY 
SVLEGLRASK QTPVLMLSAR GSVDERVKGL RHGADDYLPK PFSLIELVAR IQALLRRRPS
DGVDVSQLHI NDLHLDLLAR RVTRAGERLE LTAKEFALLS LLARHQGEIL SKMMIAEQVW
DMNFDSDANV VEVAIKRLRA KIDTPYPVKL LHTVRGMGYV LETRPERQTK