Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2084 |
Symbol | |
ID | 5386157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2393996 |
End bp | 2394688 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640865070 |
Product | DNA-binding heavy metal response regulator |
Protein accession | YP_001401057 |
Protein GI | 153947115 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.000771382 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTAT TGTTGGTAGA AGATGAGGAG AAGACATCTT CGTATATCAA TCGCGCCCTC AGCGAGTTGG GCTTTACCGT CGATGTAGCG GCCACCGGGA TCGACGGATT ATATCTGGCT CTTGAGTATG ATTACGATAC GATTGTGCTC GATGTCATGT TGCCCGGCAT GGATGGTTAC AGCGTTCTCG AAGGCCTACG CGCCAGCAAA CAAACTCCGG TTCTGATGTT ATCCGCCCGT GGCTCGGTTG ATGAACGAGT TAAGGGCCTG CGTCACGGTG CCGACGATTA TTTGCCTAAG CCTTTTTCGC TGATTGAACT GGTTGCGCGT ATCCAGGCGT TGTTGAGGCG GCGTCCCAGT GATGGTGTAG ATGTCAGCCA ATTGCACATT AATGATCTAC ATCTCGACCT GCTGGCAAGG CGTGTCACGC GAGCCGGTGA ACGTCTTGAA CTCACCGCCA AAGAGTTCGC CCTGTTAAGC CTGTTAGCCA GACATCAGGG GGAAATTCTG TCAAAAATGA TGATTGCAGA GCAGGTCTGG GACATGAATT TTGACAGCGA TGCCAATGTC GTTGAGGTGG CGATAAAACG CCTGCGGGCG AAAATAGATA CGCCCTACCC GGTCAAACTG CTGCATACAG TGCGAGGCAT GGGGTATGTC CTTGAAACTC GCCCCGAACG CCAGACTAAA TAG
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Protein sequence | MRLLLVEDEE KTSSYINRAL SELGFTVDVA ATGIDGLYLA LEYDYDTIVL DVMLPGMDGY SVLEGLRASK QTPVLMLSAR GSVDERVKGL RHGADDYLPK PFSLIELVAR IQALLRRRPS DGVDVSQLHI NDLHLDLLAR RVTRAGERLE LTAKEFALLS LLARHQGEIL SKMMIAEQVW DMNFDSDANV VEVAIKRLRA KIDTPYPVKL LHTVRGMGYV LETRPERQTK
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