Gene YpsIP31758_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2069 
Symbolipk 
ID5386125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2383853 
End bp2384752 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID640865055 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_001401042 
Protein GI153948030 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value3.05263e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCG CGAATCAACC TATATGTCCG TCACCAGCAA AATGGCCGTC ACCGGCAAAA 
TTGAATTTGT TTCTTTATAT CACCGGGCAA CGCGCCGACG GCTATCATCA GTTACAAACG
CTGTTTCAAT TTCTTGATTA TGGTGATCAA CTGACGATTG AACCGCGCGA TGACAACCAA
ATTCGCTTAT TAACCCCCAT AGCAGGGGTG GAAAATGAGC AAAACCTGAT CGTCCGCGCG
GCAAAAATGC TGCAAAAACA CCCTGGCAAT ACCCCCGTGC CACGCGGTGC TGATATCAGC
ATTGATAAAT GTTTACCGAT GGGCGGTGGA TTGGGGGGCG GTTCGTCTAA TGCAGCCACA
GTCTTGGTGG CACTCAACCT ACTGTGGCAA TGTGGTTTAA CTGATGAACA ATTAGCCGAT
CTCGGACTAA CATTAGGGGC TGATGTCCCG GTATTTGTTC GGGGCCATGC CGCCTTCGCA
GAGGGTATTG GTGAAAAATT ACAGCCAGCA GAGCCTGTAG AGAAGTGGTA TTTGGTCATA
CACCCCGGTG TAAACATCCC AACACCGATT ATTTTTTCTG ATCCTGAATT AAAAAGAAAT
ACGCCAATCC GCCCACTGGC GGCGCTTTTA AGCACTCCAT ACGCAAATGA TTGCGAACCG
ATCGCAAGAA AACGTTTTCG CGAGGTTGAA CAGGCTCTTT CATGGCTGTT AGAATACGCC
CCGTCACGCC TTACCGGTAC CGGCGCTTGT GTGTTTGCAG AATTCGACAC GGAGTCATCG
GCCCGGCAGG TGTTAAGTAT TGCCCCTGAG TGGTTACATG GTTTTGTCGC CCGTGGTGTA
AATGTTTCAC CATTGCATCG TGTACGCTCA GGGAAAATTG AAAGCAGTGA GCGCAGATAA
 
Protein sequence
MTTANQPICP SPAKWPSPAK LNLFLYITGQ RADGYHQLQT LFQFLDYGDQ LTIEPRDDNQ 
IRLLTPIAGV ENEQNLIVRA AKMLQKHPGN TPVPRGADIS IDKCLPMGGG LGGGSSNAAT
VLVALNLLWQ CGLTDEQLAD LGLTLGADVP VFVRGHAAFA EGIGEKLQPA EPVEKWYLVI
HPGVNIPTPI IFSDPELKRN TPIRPLAALL STPYANDCEP IARKRFREVE QALSWLLEYA
PSRLTGTGAC VFAEFDTESS ARQVLSIAPE WLHGFVARGV NVSPLHRVRS GKIESSERR