| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2016 |
|---|
| Symbol | |
|---|
| ID | 5387594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2321355 |
|---|
| End bp | 2322053 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640865000 |
|---|
| Product | family M22 nonpeptidase-like protein |
|---|
| Protein accession | YP_001400989 |
|---|
| Protein GI | 153949741 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0164135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACGC GAATTTTAGC GATCGATACT GCGACAGAAG CCTGTTCTGT TGCACTTTGG
AACAATGGCG AAGTTCAGGC TCTGTTTGAA CTTTGCCCCC GAGAACATAC CCAGCGTATT
TTACCGATGG TACAGCAGAT TCTGGCATCA TCAGGCTTGT CGCTTCAGCA ATTGGATGCG
CTGGCTTTTG GCCGCGGCCC CGGCAGTTTT ACCGGCGTGC GTATCGGCAT TGGTATTGGT
CAGGGGCTTG CATTAGGTGC CAATTTACCA ATGATTGGTG TTTCTACGTT GCAAACCATG
GCGCAGGGGG CGTTTCGTCT GACTGGTGCC ACACGGGTCT TGGCGGCGAT AGATGCCCGC
ATGGGCGAGG TCTATTGGGG GGAGTTTGAG CGTAATGCGG AAGGACATTG GCTGGGTGAG
CATACCGAAG CCGTGATGAC ACCCGCCCAG ACGTTGGTAC GCGCTGAGGC GCTTAGTGGT
CACTGGGCCA CGGTGGGAAC GGGCTGGCAG ACTTATCCTG ATCTGGTTAG TGGCAGTGAT
ATCGCACTGG TTGATGGGCA AATGTCACTG CCACAGGCGG AAGATATGCT CCCACTGGCT
TTGTCATCAT GGGCTCGGGG TGACGCGGTC AAAGTTGAAC AGGCTGAACC GGTCTACCTG
CGTAATGAAG TTACCTGGAA AAAACTGCCA GGTCGCTAA
|
|---|
| Protein sequence | MSTRILAIDT ATEACSVALW NNGEVQALFE LCPREHTQRI LPMVQQILAS SGLSLQQLDA
LAFGRGPGSF TGVRIGIGIG QGLALGANLP MIGVSTLQTM AQGAFRLTGA TRVLAAIDAR
MGEVYWGEFE RNAEGHWLGE HTEAVMTPAQ TLVRAEALSG HWATVGTGWQ TYPDLVSGSD
IALVDGQMSL PQAEDMLPLA LSSWARGDAV KVEQAEPVYL RNEVTWKKLP GR
|
|---|
| |