| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2013 |
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| Symbol | rnd |
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| ID | 5387681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2317001 |
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| End bp | 2318122 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864997 |
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| Product | ribonuclease D |
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| Protein accession | YP_001400986 |
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| Protein GI | 153949850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000000328628 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATTATC AGTTGATCAC GACCAATAAC GCATTGCAAC AGGTCTGCGA ACAAGCCCGG
ACACATGCTC ACATCGCGTT GGATACAGAG TTTGTCAGAA CGCGCACTTA CTACCCTCAG
TTGGGTTTGA TTCAACTGTA TGATGGTGAA CAACTCTCAC TTATAGATCC ATTACCTATC
ACGGAATGGC AGCCTTTTCG CGCGTTACTG CAAGATCTGA ATGTGGTGAA ATATTTACAC
GCAGGCAGTG AAGATCTCGA AGTGTTTTTA AACGCTTTTG ACCAGATGCC AACCCCGATG
ATTGATACTC AGGTATTAGC GGCATTTTCT GGCCGTAGCC TATCCTGCGG CTTTGCCATG
CTGGTGGCTG AGTTTGAAGG TGTTGAGTTA GATAAAAGTG AATCACGTAC AGACTGGATT
GCCCGGCCGT TGAGTGAAAA ACAGTGCGAT TATGCGGCGG CTGATGTGTT TTATCTTTTA
CCTCTGGCGG CTAAATTAGT CGAAGCCACT GAGGCGGCAG GGCGGATGGA CGCGGCGAAA
GACGAATGTC TATTGCTGTG CCGCCGTCGG AGTGAGACGC TCGATCCTGA ACTGGCTTAC
CGTGAGATTA CCAATGCCTG GCAACTCCGT GGCCATCAAC TGGCATGTTT GCAGAAATTA
GCCGAATGGC GTTTACGTCA GGCACGGGAG CGGGATTTGG CGGTTAACTT TGTGGTTAGG
GAAGAGCACC TGTGGCAAGT TGCCCGCTAT CAACCAACAT CACTCGGTGA GTTAGATTCT
CTTGGCTTGA GTGGGCAGGA GATCCGCTAT CACGGGCGAA CATTGCTGGC ACTGGTCGCC
GAAGGGAATG CCGTCCCTGA AGATCAGCTT CCTCCCCCGA TTGCTAACTT GATTGACCAA
CCGGGGTACA AAAAAGTCTT TAAAGATATT AAAGCCTTGA TTCAATCGGT CAGTGAACGT
AGCGGATTAA GCAGTGAATT ACTGGCATCA CGTCGCCAAA TTAATCAGTT ACTCAATTGG
CACTGGAAGT TGAAGCTTTC AGATGCTCAA CCTGAATTAT TAACAGGCTG GCGTGGCGAT
TTATTGTCTT CTGAATTGCT TGAAATCTTA CAACACTATT AA
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| Protein sequence | MNYQLITTNN ALQQVCEQAR THAHIALDTE FVRTRTYYPQ LGLIQLYDGE QLSLIDPLPI
TEWQPFRALL QDLNVVKYLH AGSEDLEVFL NAFDQMPTPM IDTQVLAAFS GRSLSCGFAM
LVAEFEGVEL DKSESRTDWI ARPLSEKQCD YAAADVFYLL PLAAKLVEAT EAAGRMDAAK
DECLLLCRRR SETLDPELAY REITNAWQLR GHQLACLQKL AEWRLRQARE RDLAVNFVVR
EEHLWQVARY QPTSLGELDS LGLSGQEIRY HGRTLLALVA EGNAVPEDQL PPPIANLIDQ
PGYKKVFKDI KALIQSVSER SGLSSELLAS RRQINQLLNW HWKLKLSDAQ PELLTGWRGD
LLSSELLEIL QHY
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