Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1996 |
Symbol | |
ID | 5386479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2298343 |
End bp | 2299536 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864980 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001400969 |
Protein GI | 153947935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAT TCCTTTTCCT GCTATTAAGC TTGATTTTAC TTGGCCCTTT GGGGATCGAT CTCTATCTAC CGACCATTCC AGCCATTGCA AAAGGGCTGA ATAGTAGTGA GTCTCTGATT CAATCAACTA TTGCGCTGTT TATTCTCGTG CTGGGTATCG GGCAACTGAT TGCTGGGCCA TTGGTTGATA AATATGGCCG TAAGCCAATC GCTATTATCG GTATTGTTCT TTACATGCTG GGTGCCGCGA TGGCCGCTCT GGCCGTGGAT CCAGTCATGT TCGTCAGCTC CCGCTTGTTA CAAGGTGTCT CGGTATGCTG CACAGCCGTG GTGGCCTTCA GTGGCGTCCG TGACCGCCTT AGCGGCAATG AAGCCGCACG TGCTTTTGGC TTCCTTAATG GCACGTTGAA TATTGTCCCC GCATTGGCCC CGCTATTAGG TGGTTTACTG GCCGAAGCCT TTGGCTGGCG GGCACCGTTC TGGTTCCTGG CATTATACGG ATTACTGGTT TTAGTCTTAA TCATTATGTT CTTACCCGAA ACCCGCCCGG CGAATACTCA ACCAATAAAT GGCCTGCCAA TAAAAAACTA CCTGCGTATT TTGCGTGATG GCCGCTTTTT GGTATTTGCT CTGGTCAATG CAGGGGCCAT GGGCATGGCA TTAACCTATG TATCATTGGC ACCGAATGTA TTGATGGTTG ATGCAGGCCT CAGCCCGTTA CAATTTTCGC TGGCATTTGG GGCTAATGGC TTCTGGATTA TGGCAGTCAG TTTTTTTGCT AACCGGATTA TTCAAAAAGT GGGCCGCCCT ACCTGCCTGA TGATCGGTAG CTTATTGATG GCCTTAGGCT GTTTTGGCTT GCTATTTGGT CTGACACAAC TGTCCGTTGA TGTGCAGCAT CACTGGCTGG TTTATATGTT ACCGGTTGCC AGCGCCTGTG CCGGTTTAGC CTTTATGATG GGGCCTGCCA CCAGTTATGC TCTAGAACCC TATGCGAATG AAGCGGGTGT TGCCTCAGCG TTAGTGGGAT TTGTTCAAAT GGCTGGGGGC GCTGCATTAG GCCTGTTGGC GATGGCACTG CCGATTGAAC CTAAGTTGTC ACTGGCTATC GTGATGCTGG CTGGCTGTTT ACTGGCGTGG CAAGCGCGCC GAGCCAGTAA ACATGTCCGC GGCAAGTTGG AAGAAATACA CTAA
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Protein sequence | MQKFLFLLLS LILLGPLGID LYLPTIPAIA KGLNSSESLI QSTIALFILV LGIGQLIAGP LVDKYGRKPI AIIGIVLYML GAAMAALAVD PVMFVSSRLL QGVSVCCTAV VAFSGVRDRL SGNEAARAFG FLNGTLNIVP ALAPLLGGLL AEAFGWRAPF WFLALYGLLV LVLIIMFLPE TRPANTQPIN GLPIKNYLRI LRDGRFLVFA LVNAGAMGMA LTYVSLAPNV LMVDAGLSPL QFSLAFGANG FWIMAVSFFA NRIIQKVGRP TCLMIGSLLM ALGCFGLLFG LTQLSVDVQH HWLVYMLPVA SACAGLAFMM GPATSYALEP YANEAGVASA LVGFVQMAGG AALGLLAMAL PIEPKLSLAI VMLAGCLLAW QARRASKHVR GKLEEIH
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