| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1981 |
|---|
| Symbol | |
|---|
| ID | 5386967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2282439 |
|---|
| End bp | 2282990 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640864965 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400954 |
|---|
| Protein GI | 153946980 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00000000959579 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGT TGGAACTCTT ACTTAACCGC CGCTCGGCGT CCCGTTTAAC CGCTCCGGCC
CCAGCCGGTG AGGTCTTGGA CCATATTATT CACGCAGGTA TGCGAGCTCC GGACCATGGT
GCCTTGCAGC CATGGCGCTT TGTTCTGATT GAAAACGAAG GGTTAGTGCG TTTTAGTCAA
TTGTTACAAA AAGCGGTTCA GCAAGATGGT GCTGATGAGA CGGTCTTAGA GAAAGCGAAG
CAGGCACCTT TTCGTGCTCC GCTGATTATT ACGGTGATCG CCCATGTAAC TGAGAATGCC
AAAGTGCCTA ATTGGGAACA GGTTGTTTCT GCCGGCTGTG CGGTGCAAGC AATGCAAATG
GCTGCTTTGG CACAGGGGTT TAATGGTATT TGGCGCACCG GTTCTTGGAC CCACCACCCA
GTTGTTCGTC AGGGGTTTGC GTGTCGTGAA CAAGACGAAA TAGTCGGCTT TTTGTATCTC
GGGACACCGC AATTAAAATC TGCAACTAAA ATCATGCCTC CAGACCACAG CGCTTTTGTC
CGCTATTTCT AA
|
|---|
| Protein sequence | MDALELLLNR RSASRLTAPA PAGEVLDHII HAGMRAPDHG ALQPWRFVLI ENEGLVRFSQ
LLQKAVQQDG ADETVLEKAK QAPFRAPLII TVIAHVTENA KVPNWEQVVS AGCAVQAMQM
AALAQGFNGI WRTGSWTHHP VVRQGFACRE QDEIVGFLYL GTPQLKSATK IMPPDHSAFV
RYF
|
|---|
| |