Gene YpsIP31758_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1962 
Symbol 
ID5385876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2262181 
End bp2262825 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID640864946 
Producthypothetical protein 
Protein accessionYP_001400937 
Protein GI153950489 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAAT CACTGTTGGA CCTTTCAGGT TACATCAAGT TTTTTGTTGG CTTATTTGCA 
CTGGTTAACC CAGTAGGCAT ATTGCCGGTC TTTATTAGTA TGACAAGCTA TCAGGCTGCT 
GCTGGGCGAG ATAAAACGAA TCTAACGGCG AACTTATCAG TAGCCATAAT TTTGTGGATC 
TCCTTGTTCC TTGGGGATGC CATTCTGACA ATTTTTGGTA TTTCTATTGA TTCATTCCGG 
ATTGCTGGCG GAATTCTGGT CGTCAGTATT GCGATGTCGA TGATCAGCGG TAAGCTTGGC 
GAGGATAAGC AAAACAAGCA GGAAAAAACT GAAACAGCGG TTCGGGAGAG TATTGGTGTT 
GTCCCATTGG CACTGCCTTT AATGGCTGGA CCAGGAGCAA TCAGCTCTAC CATAGTCTGG 
AGCTCCCGTT ACCATAGCTG GCAGAATTTA TTGGGGCTGA CTGCGGCTAT AGCACTGTTT 
GCTTTCTGTT GTTGGTTGCT GTTTCGTGCC GCTCCATTGC TTGTTCGTCT GCTGGGGCAG 
ACAGGTATTA ACGTCATAAC ACGAATTATG GGGTTATTGC TGATGGCATT GGGCATTGAG 
TTTATTGTCA CCGGTATCAA AGCTATTTTC CCCGGATTAC TTTAA
 
Protein sequence
MSQSLLDLSG YIKFFVGLFA LVNPVGILPV FISMTSYQAA AGRDKTNLTA NLSVAIILWI 
SLFLGDAILT IFGISIDSFR IAGGILVVSI AMSMISGKLG EDKQNKQEKT ETAVRESIGV 
VPLALPLMAG PGAISSTIVW SSRYHSWQNL LGLTAAIALF AFCCWLLFRA APLLVRLLGQ 
TGINVITRIM GLLLMALGIE FIVTGIKAIF PGLL