| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1943 |
|---|
| Symbol | |
|---|
| ID | 5387322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2245586 |
|---|
| End bp | 2247325 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640864927 |
|---|
| Product | sulfate permease family protein |
|---|
| Protein accession | YP_001400918 |
|---|
| Protein GI | 153948666 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.331101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAA AATCCCTTCG GTATTGGATG CCGGGTTTGA CCCAATTAAT GGCCTATGAG
CGTGATTGGA TAAAGCCTGA CCTCCGAGCG GGGTTATCGG TAGCCGCAGT CGCATTACCT
ATTGCCATTG CTTATGCCGA GTTGACGGGC GTTAGCGCCG CAGTCGGGTT GTACTCCTGT
ATTTTGCCGA TGATAGCCTA TGCGTTTTTT GGTTCATCGC GGCAATTAAT TGTTGGGCCA
GATGCCGCAA CCTGTGCAGT GATTGCGGCT GTGGTAGCCC CGTTGGCTGC AGGGAATAGT
GAGGTTCATT GGCAATTAAC CATCATGATG ACGTTGATGA TGGGGTCATG GTGTCTGGTC
GCCAGCCGCT TTAAGCTGGG AGCGTTGGCG GATTTATTAT CGCGGCCCAT ACTAACCGGT
TTACTGAATG GTGTGGCGAT CACGATTATT GTCGATCAAT TAGGTAAGGT TTTTGGCTTT
ATGACTCGCC CGCCACAGCT CATTGAACGA GTCTTGGCGC TCCCCTATAA CATGTTTAAC
AGCCATTTAC CTACGGTTGC CATCTCCTTA CTGACCTTTG TGGTGCTATA TGGGGTCAAA
TGGTTGAGAC CCAATTGGCC CGCACCCTTG CTGGCGATTG TCATCGCAAC CTTTGTGTCT
TGGGCCGCTA ATATGCAGCA ATTTGGTGTT GATGTGGTTG GCGGTTTTGA GGGGGGGTTA
CCCATAGTAC ATTGGCCTGA TTTTCAACCC GGCCTGTTAC GCGATATGGT CATCCCAGCC
CTTAACCTCG CTGTGGTCAG TTTTGTCAGT ATGATGCTCA CCGCTCGCAG TTTTGCAGCG
AAAAATGGTT ATGACGTTGA TGCTGATGTT GAACTTCGTG CATTGGGTAT TACGAATATT
GTTTCAGCTT TATCACAAGG TTTTGCTATT AGTGGTGCCA GTACACGCAC GGCGGTGAAT
GATGCTAACA ATGGTAAAAG CCAGTTGGTT TCTATCATTG CGGCTCTGGT GATCGCGATG
GTCCTGTTGT TCTTAACCCG CCCACTGCAA TTTATTCCCA TTGCGGCATT AGGTGTCGTG
TTGATTTACG CTGCCTGGTC GTTACTGAGC TTTAAAAGTT TGTGGCAACT GCGTAAACGC
AATACTCAAG CTTTCTATCT GGCTATTTTT ACATTTGTTA GTGTGGTTTT GGTTGGTGTT
ATCAGCGGGA TCGGCCTGGC GGTATTGTTA GGGCTGTTGC AATTTTTGCG GACCGTATTC
CGGCCGACAG AGCAACTGTT GGGTGTTAAC GCTGATGGCA TGATCCATTC CATGGGTAAC
GGCAATGGTA TTAAAGCCGT TCCTGGGGTA ATGATTTACC GTTTTAACTC ACCACTGACC
TATTTTAATG TCGCTTATTT TAAGCGGCGC ATCCTGAATT TGGTGGATAG CACGCCACAT
CCTGCTGACT GGGTCGTTAT TGATGCTGTT GCCAGTTTCA CCTACGCTGA TATCAGTGTA
TTGGCCGCCA TTGATGAACT TAAACGTGAC CTTAAGCAGC GAAATATTAA ACTGATATTA
GCGGGGCGAC GGACAGAATT AACCCGCTGG TTCCGTATTA ATCGCCTGAA AAGCCATGAT
GACGATTTGG TCTTGGTCCC GGATTTATAT CTGGCGCTTA AGTTGATTCA GAGTAAACGG
CGGGTAGCAG AGAAACAGGA ACACGAGTCA GAAACGGGAT TGGAACCTGA GATAGGCTGA
|
|---|
| Protein sequence | MQKKSLRYWM PGLTQLMAYE RDWIKPDLRA GLSVAAVALP IAIAYAELTG VSAAVGLYSC
ILPMIAYAFF GSSRQLIVGP DAATCAVIAA VVAPLAAGNS EVHWQLTIMM TLMMGSWCLV
ASRFKLGALA DLLSRPILTG LLNGVAITII VDQLGKVFGF MTRPPQLIER VLALPYNMFN
SHLPTVAISL LTFVVLYGVK WLRPNWPAPL LAIVIATFVS WAANMQQFGV DVVGGFEGGL
PIVHWPDFQP GLLRDMVIPA LNLAVVSFVS MMLTARSFAA KNGYDVDADV ELRALGITNI
VSALSQGFAI SGASTRTAVN DANNGKSQLV SIIAALVIAM VLLFLTRPLQ FIPIAALGVV
LIYAAWSLLS FKSLWQLRKR NTQAFYLAIF TFVSVVLVGV ISGIGLAVLL GLLQFLRTVF
RPTEQLLGVN ADGMIHSMGN GNGIKAVPGV MIYRFNSPLT YFNVAYFKRR ILNLVDSTPH
PADWVVIDAV ASFTYADISV LAAIDELKRD LKQRNIKLIL AGRRTELTRW FRINRLKSHD
DDLVLVPDLY LALKLIQSKR RVAEKQEHES ETGLEPEIG
|
|---|
| |