Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1925 |
Symbol | |
ID | 5386237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2229994 |
End bp | 2231040 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864909 |
Product | putative periplasmic protease |
Protein accession | YP_001400900 |
Protein GI | 153948350 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0571162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGTTAA TTTCTTTGTA CGGGCTGTTT CTGGCTAAAG TGGTGACCAT CGTGGTTGCG ATTGGTGCAG TAGTGTTATT GGTGGTCAGC CAGGGAATGA GAAGACAAGG GCAACGGGGG GAATTGAACC TGGTTGATCT GGGGGAACAA TATAAAGAAA CTCAGCGAGA AATGCGGCTG GCACGCATGA GCCATGCAGA ACAAAAAGCC TGGGTTAAAG AATTTAAAAA GCAGGAAAAA GCGGATCAAA AACTGAAGAA ACAACGCGCA AAATCGGGTG CGGTGGCGGC AGTAAAACCA TGTTTATATG TCATTGATTT TAAAGGGAGC ATTGGGGCGC AGGAGGTCTC TTCATTACGT GAAGAGATCT CTGCTATTTT GGCCGTTGCA ACCGCGCAAG ATGAAGTGTT GCTACGGCTG GAAAGTCCGG GCGGTGTGGT GCATGGCTAT GGGTTGGCGG CTTCTCAATT AGCGCGCCTG CGTCAGCGTG GGATCCGCCT GACGGTTGCG GTTGATAAAG TTGCCGCCAG TGGCGGTTAT ATGATGGCCT GTGTTGCTGA CCGCATTATC TGTGCGCCTT TCGCCATTAT TGGCTCCATT GGCGTGGTCG CTCAAATTCC GAATTTCCAT CGCTTACTGA AAAAGAACGA CATTGACGTA GAACTGCATA CCGCAGGTGA ATTTAAACGC ACACTGACGT TGTTTGGTGA GAATACGGAG CAGGGGCGTG AAAAATTCCG TGAAGATTTA AATGAAACTC ACCTGTTATT TAAACAATTC GTGCAGCAGC AACGTCCTTC TTTAGATATT GATGCTGTCG CGACGGGCGA GCATTGGTTT GGTACGCAAG CCAAAGAGAA AGGTTTGGTT GATGCTATCG GCACCAGTGA TGATTTACTG ATCGCTGAAA TGGATAATCA CGAAGTCATT GGCGTGCGTT ATTCTCATCG TAAACGCCTA ATAGAGCGTT TTATGGGGAG TGCAACCGAA AGTGTTGACA GCCTATTATT ACGTTGGTGG CAGCGGGGTG AGAAGCCGCT GCTATAA
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Protein sequence | MELISLYGLF LAKVVTIVVA IGAVVLLVVS QGMRRQGQRG ELNLVDLGEQ YKETQREMRL ARMSHAEQKA WVKEFKKQEK ADQKLKKQRA KSGAVAAVKP CLYVIDFKGS IGAQEVSSLR EEISAILAVA TAQDEVLLRL ESPGGVVHGY GLAASQLARL RQRGIRLTVA VDKVAASGGY MMACVADRII CAPFAIIGSI GVVAQIPNFH RLLKKNDIDV ELHTAGEFKR TLTLFGENTE QGREKFREDL NETHLLFKQF VQQQRPSLDI DAVATGEHWF GTQAKEKGLV DAIGTSDDLL IAEMDNHEVI GVRYSHRKRL IERFMGSATE SVDSLLLRWW QRGEKPLL
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