Gene YpsIP31758_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1925 
Symbol 
ID5386237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2229994 
End bp2231040 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content48% 
IMG OID640864909 
Productputative periplasmic protease 
Protein accessionYP_001400900 
Protein GI153948350 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0571162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTTAA TTTCTTTGTA CGGGCTGTTT CTGGCTAAAG TGGTGACCAT CGTGGTTGCG 
ATTGGTGCAG TAGTGTTATT GGTGGTCAGC CAGGGAATGA GAAGACAAGG GCAACGGGGG
GAATTGAACC TGGTTGATCT GGGGGAACAA TATAAAGAAA CTCAGCGAGA AATGCGGCTG
GCACGCATGA GCCATGCAGA ACAAAAAGCC TGGGTTAAAG AATTTAAAAA GCAGGAAAAA
GCGGATCAAA AACTGAAGAA ACAACGCGCA AAATCGGGTG CGGTGGCGGC AGTAAAACCA
TGTTTATATG TCATTGATTT TAAAGGGAGC ATTGGGGCGC AGGAGGTCTC TTCATTACGT
GAAGAGATCT CTGCTATTTT GGCCGTTGCA ACCGCGCAAG ATGAAGTGTT GCTACGGCTG
GAAAGTCCGG GCGGTGTGGT GCATGGCTAT GGGTTGGCGG CTTCTCAATT AGCGCGCCTG
CGTCAGCGTG GGATCCGCCT GACGGTTGCG GTTGATAAAG TTGCCGCCAG TGGCGGTTAT
ATGATGGCCT GTGTTGCTGA CCGCATTATC TGTGCGCCTT TCGCCATTAT TGGCTCCATT
GGCGTGGTCG CTCAAATTCC GAATTTCCAT CGCTTACTGA AAAAGAACGA CATTGACGTA
GAACTGCATA CCGCAGGTGA ATTTAAACGC ACACTGACGT TGTTTGGTGA GAATACGGAG
CAGGGGCGTG AAAAATTCCG TGAAGATTTA AATGAAACTC ACCTGTTATT TAAACAATTC
GTGCAGCAGC AACGTCCTTC TTTAGATATT GATGCTGTCG CGACGGGCGA GCATTGGTTT
GGTACGCAAG CCAAAGAGAA AGGTTTGGTT GATGCTATCG GCACCAGTGA TGATTTACTG
ATCGCTGAAA TGGATAATCA CGAAGTCATT GGCGTGCGTT ATTCTCATCG TAAACGCCTA
ATAGAGCGTT TTATGGGGAG TGCAACCGAA AGTGTTGACA GCCTATTATT ACGTTGGTGG
CAGCGGGGTG AGAAGCCGCT GCTATAA
 
Protein sequence
MELISLYGLF LAKVVTIVVA IGAVVLLVVS QGMRRQGQRG ELNLVDLGEQ YKETQREMRL 
ARMSHAEQKA WVKEFKKQEK ADQKLKKQRA KSGAVAAVKP CLYVIDFKGS IGAQEVSSLR
EEISAILAVA TAQDEVLLRL ESPGGVVHGY GLAASQLARL RQRGIRLTVA VDKVAASGGY
MMACVADRII CAPFAIIGSI GVVAQIPNFH RLLKKNDIDV ELHTAGEFKR TLTLFGENTE
QGREKFREDL NETHLLFKQF VQQQRPSLDI DAVATGEHWF GTQAKEKGLV DAIGTSDDLL
IAEMDNHEVI GVRYSHRKRL IERFMGSATE SVDSLLLRWW QRGEKPLL