Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1889 |
Symbol | |
ID | 5388345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2189866 |
End bp | 2192004 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864873 |
Product | type I secretion system ATPase |
Protein accession | YP_001400864 |
Protein GI | 153948819 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAGT CTTATTCAAC TCTGGCCGCC GAGGGCACCA AGGTTATTCA GCCACTGGAG GCGTTGGCGT GTGCTGCTAC CTGTTTTGAT TTAACCATCG AAGCTTCGCA ATTGGCACAC CAACTAGGCT TAGCTCCCGA TGAGATAGAC AGTATTGCCT TGTGCCGTTG TGCTGCTTGG ATAGGGTTAC GAGCGCGGAA AGTTAATCAG TCTTTTGAAC GTGTGGGAAA GCTGGTATTA CCCGTTTTAT TCAGTGATGG TGCTCAGTGG TATGTTTTGC TGTCGCTGAC CGCGCAGGAG GCCACTGTCT ATTTTGCAGG CAGCGACCAG ACGCGGAAAA TAAGTCCAGA AGTCCTTGCA AAATTGTGGC GCAATGAGGT GATTTTGCTG GCGAAAGCGG AACCGATAAC GGCCAAAAAG CAGTTTTTCG GTTTTAGCTG GTTTATTCCG GTGGTGATGA AGTCCCGGCA TCAGCTACGT AACATTATTC TTATCTCATT ACTGCTACAA GCCATTTTAC TCGTCACGCC AATGCTATTT GAAACCGTTA TCGATAAAGT GTTGGTAAGC CGCGGGGTCG ATAGTTTGGT GGTTCTAGGT GGAGCCATGG TGGCACTGGC GATTGCTGAA CCGGGGTATA CCTTATTACG TAGCTGGCTG TTTGCGCATT TGTCCAGCAG GGTGGGGGCT GAACTCAATA CACAGTTATA TCGGCATCTT CTGGGGCTGC CACTGGGGTA TTTTACCGGC CAACAGACAG GGCAAACTAT CGCCAAGATG CGAGAAATGG AGCAAATTCG CAGCTTCCTT ACGGGCTCAG CCCTGACTAT GGTGTTGGAT CTGTTTTTTG TCGTCACCTT TATTGCCGTG ATGTTTCGCT ACAGTGGTCA ATTGACGGGG ATCGTATTGA TTTCCCTGCT TTGTTATCTG CTATTTTGGT CGGCAGTTGG GGGGCGGTTA CGCAAGCGAG TGGCGCAGCA ATACGAAACC AGTGCGCAAG CAACCTCGTT CCTGACCGAG GCGGTCAGCG GGGTAGAAAC CATCAAAACC TCGGCAACCG AAAGTCAGTT TAACCGGCGT TGGCGTCAAG TATTAGCACG CTATGTACGG GCCTCTTTTG GCAGTTCGCA GGCAGGGAAC TTGGCAGGTC AAGGGATCTC GCTCATTAAT AAAATAACGT CAGCAATTCT GTTATGGTTT GGCGTGACCC TCGTATTGGC AGGAAAACTC AGCCCAGGTG AACTGGTGGC GTTTAATATG TTTGCCGGTT ACGTAACCCA ACCTATATTA CGCTTGGCTC AGGCATGGCA AGACTTCCAA CATACGCAGA TTGCGCTGGA GCGGATTGGC ACCATTCTGG ATAGCCCCAC CGAACCCGGA AGTGCCGGGC TGGTTGCCAA CTGCGAACGG GCAGGGAGCT TAAGTTTTAA GCAAGTGCGC TTCCGTTATC GCCCTGATAC CGCAGAAGTT TTACAAAATC TCAATCTGGA GATTGCCGGT GGAGAATTTA TCGGCATTAC CGGGCCATCG GGGTGCGGTA AATCGACACT GACCAAGCTA ATGCAACGCT TATATACGCC ACAACATGGG CAGATTCTGG TCGATGGGCA GGATTTGGCG ATTACTGACC CCACCACGCT GCGCCGTCAA ATGAGTGTGG TATTGCAGGA AAGCGTTCTA TTTTCGGGCA GCATTCGGGA CAATATTTGT CAATGTCGGC CCAATGCAGA TGAGGCTCAT GTGATACATA TTGCCCGGTT GGCCGGGGCG CATGATTTTA TTATTGCGTT GCCGCAGGGT TATCAAACTC AGGTCGGTGA AAAGGGGGGG CTGCTTTCTG GCGGGCAACG TCAGCGGATT GCACTGGCAA GGGCGCTGAT GGCTGATCCC AAGATTCTTA TCCTTGATGA AGCAACCAGT GCGTTGGACT ATGAATCGGA GGCGGCGATT ATGCGCCAAT TACCGGAAAT CACCCGTAAC CGCACGGTTA TCTGCATTGC ACACCGTTTG AATACACTAC GTCAGTGCCA CCGCATTTTG TTACTAAAAG ATGGGCAAAT TGCGGAGCAA GGTAGTCATG AAGTCTTGGT AGCAAGTGGT GGGAATTACG CTCGTCTGTG GCAACAGCAG ACAGAGTAG
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Protein sequence | MTESYSTLAA EGTKVIQPLE ALACAATCFD LTIEASQLAH QLGLAPDEID SIALCRCAAW IGLRARKVNQ SFERVGKLVL PVLFSDGAQW YVLLSLTAQE ATVYFAGSDQ TRKISPEVLA KLWRNEVILL AKAEPITAKK QFFGFSWFIP VVMKSRHQLR NIILISLLLQ AILLVTPMLF ETVIDKVLVS RGVDSLVVLG GAMVALAIAE PGYTLLRSWL FAHLSSRVGA ELNTQLYRHL LGLPLGYFTG QQTGQTIAKM REMEQIRSFL TGSALTMVLD LFFVVTFIAV MFRYSGQLTG IVLISLLCYL LFWSAVGGRL RKRVAQQYET SAQATSFLTE AVSGVETIKT SATESQFNRR WRQVLARYVR ASFGSSQAGN LAGQGISLIN KITSAILLWF GVTLVLAGKL SPGELVAFNM FAGYVTQPIL RLAQAWQDFQ HTQIALERIG TILDSPTEPG SAGLVANCER AGSLSFKQVR FRYRPDTAEV LQNLNLEIAG GEFIGITGPS GCGKSTLTKL MQRLYTPQHG QILVDGQDLA ITDPTTLRRQ MSVVLQESVL FSGSIRDNIC QCRPNADEAH VIHIARLAGA HDFIIALPQG YQTQVGEKGG LLSGGQRQRI ALARALMADP KILILDEATS ALDYESEAAI MRQLPEITRN RTVICIAHRL NTLRQCHRIL LLKDGQIAEQ GSHEVLVASG GNYARLWQQQ TE
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