Gene YpsIP31758_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1872 
Symboltus 
ID5388239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2168751 
End bp2169686 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content44% 
IMG OID640864856 
ProductDNA replication terminus site-binding protein 
Protein accessionYP_001400847 
Protein GI153948971 
COG category 
COG ID 
TIGRFAM ID[TIGR02648] DNA replication terminus site-binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00638426 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT ATGATTTGAT AGAACGAATG AATACTCGCT TTGCTGAGTT AGAAGTAACA 
CTTCATCAAC TCCACCAGCA ATTGGACGAT TTACCTCTAA TTGCGGCCAG AGTATTTTCT
CTCCCTGAAA TAGAAAAAGG CACTGAGCAT CAACCCATTG AGCAAATTAC CGTCAATATA
ACCGAGGGTG AACACGCCAA AAAGTTGGGG TTACAACATT TCCAACGATT ATTTCTTCAT
CACCAAGGGC AGCATGTTAG CAGTAAAGCA GCACTACGCT TACCTGGCGT GCTCTGCTTC
TCCGTGACAG ACAAAGAACT CATTGAATGC CAAGATATAA TAAAAAAAAC CAATCAGTTA
AAAGCTGAGT TAGAACATAT TATTACTGTG GAATCAGGCT TACCCAGCGA ACAACGCTTT
GAATTTGTTC ACACACACTT ACATGGCCTG ATAACCCTGA ATACCTACCG CACCATTACC
CCATTAATCA ACCCCAGTTC AGTGCGCTTT GGCTGGGCCA ACAAACACAT TATTAAAAAT
GTGACTCGCG AAGATATATT GCTACAGCTA GAAAAAAGCC TGAATGCTGG CCGAGCTGTT
CCTCCATTTA CGCGTGAGCA ATGGAGGGAA CTGATTAGCT TGGAAATAAA TGATGTGCAG
CGTTTGCCAG AAAAGACACG GCTGAAAATT AAAAGGCCCG TAAAAGTGCA GCCCATCGCA
AGAGTATGGT ATCAAGAACA ACAAAAACAG GTACAACACC CCTGCCCCAT GCCTCTGATT
GCGTTCTGTC AGCGTCAGTC AGGGGCCGAG CTACCGAAAT TAGGCGAGTT GACCGATTAT
GATGTGAAGC ATATCAAGCA TAAATATAAG CCAGATGCGA AACCGCTACG TTTGCTGGTA
CCGCGCTTGC ATCTTTATGT CGAACTGGAA CCGTAA
 
Protein sequence
MNKYDLIERM NTRFAELEVT LHQLHQQLDD LPLIAARVFS LPEIEKGTEH QPIEQITVNI 
TEGEHAKKLG LQHFQRLFLH HQGQHVSSKA ALRLPGVLCF SVTDKELIEC QDIIKKTNQL
KAELEHIITV ESGLPSEQRF EFVHTHLHGL ITLNTYRTIT PLINPSSVRF GWANKHIIKN
VTREDILLQL EKSLNAGRAV PPFTREQWRE LISLEINDVQ RLPEKTRLKI KRPVKVQPIA
RVWYQEQQKQ VQHPCPMPLI AFCQRQSGAE LPKLGELTDY DVKHIKHKYK PDAKPLRLLV
PRLHLYVELE P