| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1868 |
|---|
| Symbol | bioD1 |
|---|
| ID | 5384437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2163832 |
|---|
| End bp | 2164500 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640864852 |
|---|
| Product | putative dithiobiotin synthetase |
|---|
| Protein accession | YP_001400843 |
|---|
| Protein GI | 153947179 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.218738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACGC GTTTATTTGT GACAGGTACC GACACTGCTG TTGGTAAAAC CGTCGTGTCA
CGGGCTTTAC TTCAAGCCTT AAGCCAAAAT GGCAGAACCG CAGTAGGCTA TAAACCTGTT
GCGACAGAAA GCAAAGAGAC CTCGGAAGGG TTGCGTAATC AAGATGCGTT GATCTTGCAG
GCGTCATCAT CCATTGAGTT AAATTATCAG GAGGTAAATC CATATCCATT ACAAGGTGAT
GTTATTCATG CCTGTACAGA TACCCTGATT AATTATGAAA AGATGACCGA AGGATTGCAG
TGTTTATCGG CTAAAGCAGA TACCGTAATC GTTGAAGGCT GCGGTGGGTG GAAGGTTATG
ATGAATGACC AACGCTTTTA CTCTGACTGG GTGGTACAAG AACAATTACC CGTTATTTTA
GTCGTCGGAA TTAAATTAGG CTGTATCAAT CACGCCTTAT TAACAGCACA GGCAATTATT
AATGATGGGT TGCCCTTATT GGGTTGGGTT GCCAATCGCA TTAATCCTGG CTTGGCCCAT
TATGCTGAAA CAATCGCAAT GCTACGGGAT CGGTTAGCCG CGCCACAATT AGGGCAACTG
CCTTATTTGC CGCGACCAGA AGAAAAACCA TTAGCAAAAT ATTTAGATCT TACAGCTATT
TCAGGATAA
|
|---|
| Protein sequence | MLTRLFVTGT DTAVGKTVVS RALLQALSQN GRTAVGYKPV ATESKETSEG LRNQDALILQ
ASSSIELNYQ EVNPYPLQGD VIHACTDTLI NYEKMTEGLQ CLSAKADTVI VEGCGGWKVM
MNDQRFYSDW VVQEQLPVIL VVGIKLGCIN HALLTAQAII NDGLPLLGWV ANRINPGLAH
YAETIAMLRD RLAAPQLGQL PYLPRPEEKP LAKYLDLTAI SG
|
|---|
| |