Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1864 |
Symbol | |
ID | 5386217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2160491 |
End bp | 2161240 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864848 |
Product | 3-hydroxy acid dehydrogenase |
Protein accession | YP_001400839 |
Protein GI | 153948729 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.612513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATAT TCGTCACTGG TGCGACATCA GGTTTTGGTG AGGCGATTGC CCGTAAATTT ATTAGCCACG GTCATCAGGT CATTGCCGCC GGCCGCCGTC AGGAACGTCT GGAAGCGCTA CAAGCCGAAC TGGGTGCACA ACTGCACATC GTACGTCTGG ACGTGCGTAA TCGCGCAGCT ATTCAACAAG TTATTGATGA ATTACCTGCT GAGCTGAGGA ATATCGACTT ATTGGTAAAC AACGCCGGGT TGGCATTGGG ATTAGAGCCA GCACATAAAG CCAACGTTGA TGATTGGGAT ACAATGATTG ATACCAATAC CAAAGGGTTG GTAAATATGA CTCGAGCCTT ATTACCTGCG ATGGTTGAAC GTAATGTGGG ACACATTATT AATATTGGCT CTACCGCGGC TAATTGGCCA TACGCGGGGG GAAATGTGTA CGGCGCGACA AAAGCGTTTG TTAAACAATT TAGTTTGGGT TTACGTGCCG ACCTACATGG CACTCATATC CGTGTTACCG ATATTGAGCC CGGCCTGGTC GGCGGTACTG AGTTTTCAGC GGTTCGTTTT AAAGGTGATG GAGAAAAGGT CAATAAAACC TACGATGGTG CAGATCCCCT GATGCCAGAA GATATCGCTG AAGCTGTTTA TTGGGTTGCA ACGCTCCCTG CCCGCGTCAA TATTAACTCA TTGGAAATGA TGCCAGTAAG TCAGTCTTTT GCTGGGCTGA ATATTCATCG CGGTTCCTAA
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Protein sequence | MIIFVTGATS GFGEAIARKF ISHGHQVIAA GRRQERLEAL QAELGAQLHI VRLDVRNRAA IQQVIDELPA ELRNIDLLVN NAGLALGLEP AHKANVDDWD TMIDTNTKGL VNMTRALLPA MVERNVGHII NIGSTAANWP YAGGNVYGAT KAFVKQFSLG LRADLHGTHI RVTDIEPGLV GGTEFSAVRF KGDGEKVNKT YDGADPLMPE DIAEAVYWVA TLPARVNINS LEMMPVSQSF AGLNIHRGS
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