Gene YpsIP31758_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1856 
SymbolnhaC 
ID5386473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2150590 
End bp2152044 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content49% 
IMG OID640864840 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001400831 
Protein GI153947593 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID[TIGR00931] Na+/H+ antiporter NhaC 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACA AAAAAGAGCT AAGCTTGGGA CTGGCATTAT TGCCGATCGT GTCAATGCTG 
ACTCTGTTAG TCGTGGGATA TGGTCAGTTT GGGCTACGCA TTGAGCCCTT GCTACTTTTA
TCCGCGGGTA TCACCGCTGC CTTAGCTTAT TGGCAGGGAT ATCGCTGGGA TGACATTATT
GAATCTATTG TGGCAAAGCT AGCCAAAGCG ATGCCTGTGA TCTTGATTTT AGTCTGTGTC
GGGGGGCTTA TTGGCACCTG GATGGTCAGT GGGACCATTC CTTATATGGT TTACTGGGGA
CTAAAGCTGA TTAGTCCACA ATACATCCTG ATATCGGCCT TCTTTATTAC CAGTGTCATT
TCTGTCTGTA CAGGCACATC TTGGGGCTCT GCCGGCACTG TTGGCGTTGC TCTTATGGGC
GTAGCTGCTG GTCTTGATGT ACCGTTAGCT GCGGCAGCGG GTGCAGTAGT TTCTGGGGCC
TATTTCGGCG ATAAAATCTC CCCACTTTCT GACTCAACAA ACTTCGCAGC AATTGTTGCG
GATACCGACC TTTATGTTCA TATCAAGCAT TTGATGTATA CCACCCTCCC AAGTTTCGTT
TTGGCCGCCA TCGTCTATCT AATTGCCGGT CATTCCAGCT CGATCGGCAG TGCGGCGACA
CCTGAAAAAG TAACGGAGAT CATCCAGGCG CTTGAGGGGT TATATCACTT TAACGTGTTA
CTGATTTTGC CTCCGGTCTT GGTCTTGTGG GGCGCAATAA TAAAGTGGCC AGTTATTCCG
GTGATGCTGG CAGGATGTGC GCTGGCGATT GTAATTGCTG TTGTTCTACA AGGATTTACG
TTACAGCAAG GATTAGAGTC CTTGATGGAT GGTTTCAATC TGTCAATGTT TGCCGATCAG
GGGCATACCG TATCCGGTAT TGTCAGTGAC GTTCCTCGTC TGTTGAACCG TGGTGGTATG
TTCTCAATGA TGAGTACCAT CCTTTTGGTC TTCTGTGCAT TCTCATTTGC GGGTGCATTG
ACTCTGACAG GCGCACTGAC GGTCATTATC AACCGCTTGC TGAAGGTTGT ACGCACGGTC
GGGCAACTTA TTGCTGCGAC GGTCGCAACC ACAATTTTAG TGACGGGTGC CACCAGTGAT
GGGAAGTTAG CGCTGCTAAT CCCCGCAGAA TTGTTCAAAG ACGCTTATGG CCGAATGGGT
TTGGATAATA AAAATCTATC AAGGACTGTC GAAGATGCCG GTACCGTTAT TGAGCCTTTG
ATCCCATGGA CCGCCGCAGG GATCTACATG GCGACAACGC TGGGAGTCAG TACTTTGGAT
CTGTTACCGT GGGCTGTTCA GTGTTATGCC GCTGTATTCT TTGCCCTTCT TTATGGTTTT
ACCGGTTTCG GTATAGCCAA AGTAAAACCT GAGAGTGCAG GTCAGCGTCA GGAGGTGCAA
CATGAAACAG CCTAA
 
Protein sequence
MDNKKELSLG LALLPIVSML TLLVVGYGQF GLRIEPLLLL SAGITAALAY WQGYRWDDII 
ESIVAKLAKA MPVILILVCV GGLIGTWMVS GTIPYMVYWG LKLISPQYIL ISAFFITSVI
SVCTGTSWGS AGTVGVALMG VAAGLDVPLA AAAGAVVSGA YFGDKISPLS DSTNFAAIVA
DTDLYVHIKH LMYTTLPSFV LAAIVYLIAG HSSSIGSAAT PEKVTEIIQA LEGLYHFNVL
LILPPVLVLW GAIIKWPVIP VMLAGCALAI VIAVVLQGFT LQQGLESLMD GFNLSMFADQ
GHTVSGIVSD VPRLLNRGGM FSMMSTILLV FCAFSFAGAL TLTGALTVII NRLLKVVRTV
GQLIAATVAT TILVTGATSD GKLALLIPAE LFKDAYGRMG LDNKNLSRTV EDAGTVIEPL
IPWTAAGIYM ATTLGVSTLD LLPWAVQCYA AVFFALLYGF TGFGIAKVKP ESAGQRQEVQ
HETA