| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1837 |
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| Symbol | |
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| ID | 5387247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2127367 |
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| End bp | 2128041 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640864821 |
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| Product | nucleotidase |
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| Protein accession | YP_001400812 |
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| Protein GI | 153949420 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC AATGGATATT GTTCGATGCG GATGAAACAC TATTTCACTT TGACGCTTAT
CAAGGGTTAA AGCTGATGTT CTCACGCTTT AATGTTGAAT TTTCTGCGCA AGATTTTGAC
CATTACCAAT TAGTTAACAA GCCACTGTGG GTCGATTATC AAGACGGTAA AATATCTGCT
ACCCAGTTGC AAAATACACG GTTTGAAATG TGGGCCGAAA AATTGGGCGT CACCGCAACA
CGTCTGAACA GTGAGTTTTT ACTGGCGATG GCCGATATTT GTTCATTATT ACCGGGCGCA
CGCGAACTGG TTGATGCCTT AAGCGGTAAA GTAAACATGG GCATTATTAC CAATGGTTTC
ACTGAGTTGC AGACCATTCG TTTAGAGCGC ACGGGGTTTA AAGATATTTT TTCACCTCTG
ATTATCTCTG AACAAGTGGG TGTCGCTAAG CCTGATGTTG CCATTTTTGA GTATGCGTTT
AACGTAATGG ATAACCCACC TAAAGAACAT ATTTTGATGG TAGGCGATAA TTTACACTCC
GATATTCAGG GCGGAATTAA TGCGGGCATC GATACGTGTT GGTTAAATAC ACAGGGTGTT
GCCGGGGATG ATAATATTGC GCCACGCTAT CAAGTGAGCT CATTAGCCGA ATTGCAGGCA
TTATTATTTG CATAA
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| Protein sequence | MKYQWILFDA DETLFHFDAY QGLKLMFSRF NVEFSAQDFD HYQLVNKPLW VDYQDGKISA
TQLQNTRFEM WAEKLGVTAT RLNSEFLLAM ADICSLLPGA RELVDALSGK VNMGIITNGF
TELQTIRLER TGFKDIFSPL IISEQVGVAK PDVAIFEYAF NVMDNPPKEH ILMVGDNLHS
DIQGGINAGI DTCWLNTQGV AGDDNIAPRY QVSSLAELQA LLFA
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