Gene YpsIP31758_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1772 
SymbolpdxH 
ID5386056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2048651 
End bp2049304 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID640864755 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001400747 
Protein GI153947142 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.382068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGA ATAATGAGTT TGATGTTGCA GACTTGCGTC GTGAGTATAT CCGGGGTGGT 
CTGCGCCGCA GTGATTTAAC TGAAAACCCT TTAGAATTAT TCGAGCGCTG GTTAAAACAG 
GCATGTGAAG CTCGCTTGCC CGATCCGACC GCAATGTGTG TGGCTACCGT TGATACCAAT 
GGTCAGCCCT ACCAGCGTAT CGTGCTCCTG AAACATTATG ATGATCAGGG CTTGGTGTTT 
TACACCAATC TAGGTAGCCG CAAAGCACAA CAACTGGCTG AGAACCCGCA CATCAGCCTA 
TTGTTTCCCT GGCATATGCT GGATCGGCAA GTGGTTTTCC TCGGCAAGGC GGAGCGCCTC 
TCCACATTGG AAGTCCTGAA GTATTTCCAT TCCCGTCCGA AAGACAGTCA AATTGGTGCT 
TGGGTTTCCC AGCAATCCTC ACGTATTTCT GCTCGTGGTG TCCTGGAAAG CAAATTTCTT 
GAGCTGAAAC AAAAATTCCA GCAGGGTGAC GTACCGCTGC CCAGTTTTTG GGGCGGATTT 
CGCGTCAAAT TCGATTCCGT TGAGTTTTGG CAGGGGGGGG AACATCGCCT TCATGACCGT 
TTTATCTATC AACGGGAAGC CGACGCGTGG AAAATTGACC GTTTAGCCCC TTAG
 
Protein sequence
MTENNEFDVA DLRREYIRGG LRRSDLTENP LELFERWLKQ ACEARLPDPT AMCVATVDTN 
GQPYQRIVLL KHYDDQGLVF YTNLGSRKAQ QLAENPHISL LFPWHMLDRQ VVFLGKAERL 
STLEVLKYFH SRPKDSQIGA WVSQQSSRIS ARGVLESKFL ELKQKFQQGD VPLPSFWGGF 
RVKFDSVEFW QGGEHRLHDR FIYQREADAW KIDRLAP