| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1744 |
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| Symbol | sufD |
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| ID | 5386357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2017948 |
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| End bp | 2019273 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864724 |
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| Product | cysteine desulfurase activator complex subunit SufD |
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| Protein accession | YP_001400719 |
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| Protein GI | 153947648 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000189062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCT TACCGACCAA CAGTAACGTT CTGGAAAGAC AGCGGCTAGA ACAGCAGCGA
CGAGAACAAC AGCGGATTGA TGCATTAAAG CATTTCGGTC AGTTGTTTAC GCAGCGTCAG
ATCGAACCCT CTGCAGATGC CCGCGCCCAT TGGCAGCAGG TGCTGCAACT GGGGTTCCCC
GGCAGTAAAC ATGAAGACTG GAAATACACG CCGCTGGAGC GTTTATTAGC GCATGAATTC
AGTTTCTCCC ATGCGCCAGA TGTGACAACA ACGCAGTGCG ATGCACTGTC TCTGGTACCC
AATGCACACC GTTTGGTCTT CATTAATGGC CAGTTTTCGC CGACGTTAAG TGACCGTGAG
TGCGGTCCTT ATCAATTAAC GCATGCGGCT GAAAGTGTGG CGTTCCCTAC GGCCATACAA
TCAGAGGTGT TTTTGCACCT AACAGAAAGT TTGGCGCAGG AACGTCTGCA TATTCGGTTA
CCTGTAGGCC AACACAGTGA CAAGCCCTTA TACCTTCTGC ATATCAGCTC AGGTAACAGC
TCGGATATGG TGAATACCAG CCACTCTCGC CATCATCTGG TGGTTGAGGC GAACGCACAG
GCTGAAGTTA TAGAGCACTT TGTCAGCCTC AATGAACAAC CCCATTTTAC CGGGGCGCGG
CTGACAATCT CGTTGGGTGA TAACGCTGAA TTGAATCATT GTAAGTTGGC GTTTGAAACG
CCGAAGAGTT ATCACTTTGC TCATAACGAT CTGGTCTTAG GGCGTGATGC ACGGGCGCGT
AGCCACAGTT TCCTGCTGGG GGCGGGGCTA ACGCGCCATA ACACCAGCAG CCAGTTAAAT
GGTGAAGGTT CGTCATTATC GATTAATAGC CTACTGCTGC CGGTTGGGCG CGAGATTTGT
GATACCCGAA CTTATTTGGA ACATAACAAA GGCCACTGCG AAAGCCGACA GTTGCATAAA
GTCATGGTAC GTGAGCGGGG CAAGGCTATT TTTAACGGCA TGATTAAAGT CGCTAAACAT
GCGCTGAAAA CTGACGGGCA GATGACTAAC AACAATCTGC TGTTGAGCAA TTTGGCTGAA
GTCGATACCA AACCTCAGTT GGAAATTTAT GCCGATGATG TGAAATGCAG CCATGGAGCT
ACCGTCGGGC GTATTGATGC GGAGCAACTA TTTTATCTGC AATCGCGCGG TATCAATCAG
GCTGATGCGC AACAGATGAT TATTTTTGCG TTTGCTGCTG AAGTGACTGA AGCTATTCAC
AACGACGTCA TCCGTAAACA GGTATTAGCA CGTATTGCTG AACGTTTGGC GTGGGAGTCC
TTATGA
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| Protein sequence | MAGLPTNSNV LERQRLEQQR REQQRIDALK HFGQLFTQRQ IEPSADARAH WQQVLQLGFP
GSKHEDWKYT PLERLLAHEF SFSHAPDVTT TQCDALSLVP NAHRLVFING QFSPTLSDRE
CGPYQLTHAA ESVAFPTAIQ SEVFLHLTES LAQERLHIRL PVGQHSDKPL YLLHISSGNS
SDMVNTSHSR HHLVVEANAQ AEVIEHFVSL NEQPHFTGAR LTISLGDNAE LNHCKLAFET
PKSYHFAHND LVLGRDARAR SHSFLLGAGL TRHNTSSQLN GEGSSLSINS LLLPVGREIC
DTRTYLEHNK GHCESRQLHK VMVRERGKAI FNGMIKVAKH ALKTDGQMTN NNLLLSNLAE
VDTKPQLEIY ADDVKCSHGA TVGRIDAEQL FYLQSRGINQ ADAQQMIIFA FAAEVTEAIH
NDVIRKQVLA RIAERLAWES L
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