Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1743 |
Symbol | sufC |
ID | 5384317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2017227 |
End bp | 2017973 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864723 |
Product | cysteine desulfurase ATPase component |
Protein accession | YP_001400718 |
Protein GI | 153947283 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0361641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGTA TTAAGAATTT AAAAGTTAGC GTTGAAGGTA ATGAAATCCT CAAAGGTTTA GATCTGGAGA TCAAACCGGG TGAAGTACAC GCTATCATGG GGCCGAACGG CTCAGGGAAA AGTACTTTAT CAGCGGCATT GGCAGGGCGT GAAGAGTATG AAGTCACCGA AGGTGAAGTC ACTTTTAAAG GAAAAAACTT ACTCGAACTT GCCCCAGAAG ATCGTGCAGG GGAAGGTGTC TTTTTAGCTT TCCAGTATCC GGTAGAAATC CCCGGTGTCA GTAACCATTT CTTCCTGCAA ACCTCGGTTA ATGCCGTGCG TAAATATCGT CAGCAGGCGC CATTGGACCG CTTTGATTTC TCTGATTTTA TTGAAGAAAA AATTGCCTTG CTGAAAATGC CGGCTGATTT GCTGACCCGC TCGGTCAATG TGGGTTTCTC CGGTGGTGAG AAGAAACGTA ATGATATTCT GCAGATGGCA GCATTAGAGC CTTCGTTGTG TATTCTGGAT GAGACAGATT CTGGGCTGGA TATTGATGCA CTGAAAATCG TGGCCAATGG CGTTAACTCA CTGCGCAATG AGAACCGCTC ATTTATTATC GTTACCCACT ACCAACGTAT TCTGGATTAC GTTAAACCTG ATTTCGTCCA TGTGTTGTAT CAGGGGCGGA TCATTAAATC GGGTGATTTC ACGTTAGTGA AACAGTTGGA GGAGCAAGGC TATGGCTGGC TTACCGACCA ACAGTAA
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Protein sequence | MLSIKNLKVS VEGNEILKGL DLEIKPGEVH AIMGPNGSGK STLSAALAGR EEYEVTEGEV TFKGKNLLEL APEDRAGEGV FLAFQYPVEI PGVSNHFFLQ TSVNAVRKYR QQAPLDRFDF SDFIEEKIAL LKMPADLLTR SVNVGFSGGE KKRNDILQMA ALEPSLCILD ETDSGLDIDA LKIVANGVNS LRNENRSFII VTHYQRILDY VKPDFVHVLY QGRIIKSGDF TLVKQLEEQG YGWLTDQQ
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