Gene YpsIP31758_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1713 
SymbolinfC 
ID5387871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1982901 
End bp1983452 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID640864694 
Producttranslation initiation factor IF-3 
Protein accessionYP_001400690 
Protein GI153948799 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.56147e-12 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTAAAGGCG GAAAACGAGT TCAACCGGCG CGTCCTAATC GCATCAACAA AGAGATTCGC 
GCCACAGAAG TTCGCTTAAC AGGCGTCGAT GGTGAACAGA TTGGTATTGT CAGTCTGAAT
GAAGCTCTTG AAAAAGCCGA GGAAGCTGGT GTTGATTTAG TAGAAATCAG TCCGAATGCC
GAGCCGCCAG TTTGTCGTAT CATGGATTAC GGCAAATTCC TCTACGAGAA GAGCAAGTCG
ACAAAAGAAC AGAAGAAGAA GCAAAAAGTC ATTCAGGTTA AGGAAATTAA ATTCCGTCCT
GGTACCGATG ATGGCGACTA TCAGGTCAAA CTACGCAACC TGATTCGCTT TCTGGAAGAT
GGCGATAAAG CCAAAATCAC CCTGCGGTTC CGTGGGCGTG AAATGGCGCA CCAACAGATC
GGTATGGAAG TGCTTAACCG CGTCCGTAAA GATCTGTGTG AAGATTCTGA TTTGGCCGTT
GTCGAGTCCT TCCCGACTCG TATCGAAGGC CGTCAGATGA TCATGGTGCT CGCACCTAAG
AAGAGACAGT AA
 
Protein sequence
MKGGKRVQPA RPNRINKEIR ATEVRLTGVD GEQIGIVSLN EALEKAEEAG VDLVEISPNA 
EPPVCRIMDY GKFLYEKSKS TKEQKKKQKV IQVKEIKFRP GTDDGDYQVK LRNLIRFLED
GDKAKITLRF RGREMAHQQI GMEVLNRVRK DLCEDSDLAV VESFPTRIEG RQMIMVLAPK
KRQ