Gene YpsIP31758_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1712 
SymbolthrS 
ID5386224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1980969 
End bp1982897 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content47% 
IMG OID640864693 
Productthreonyl-tRNA synthetase 
Protein accessionYP_001400689 
Protein GI153950233 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.03633e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTA TTACCCTTCC TGATGGCAGT CAGCGTCATT ATGACCATGC TGTTTCTGTC 
CTTGATGTTG CTCTTGATAT CGGCCCTGGC TTAGCAAAAG CCTGCATTGC CGGTCGGGTG
AATGGTGAGC TGGTGGATGC CAGTGATCTG ATTGAGTCCG ATGCTCAGTT GGCGATTATC
ACCGCCAAAG ATGCTGAAGG TTTGGAGATT CTTCGCCATT CCTGCGCGCA TTTGTTGGGA
CACGCTATCA AGCAACTCTG GCCAGATACC AAAATGGCTA TTGGTCCAGT TATTGACAAC
GGTTTTTATT ACGATGTTGA TATCGAACAT ACTCTGACGC AGGAAGACTT GGCACTGCTG
GAAAAGCGGA TGCACGAGCT TGCCGATAAA GATTATGACG TGATCAAGAA AAAAGTCAGT
TGGCAAGAAG CCCGTGATAC TTTTGCTGCT CGGGGCGAAG ATTATAAAGT GGCTATTCTT
GATGAGAATA TCAGTCGCGA TGATCGTCCG GGCTTGTATC ACCATGAAGA ATACGTTGAT
ATGTGCCGTG GTCCGCACGT ACCGAATATG CGTTTCTGCC ATCACTTTAA ATTGCAGAAA
ACTTCCGGTG CTTATTGGCG TGGCGACAGC AAAAATAAAA TGCTGCAACG TATCTATGGC
ACAGCTTGGG GTGATAAGAA GCAACTGAAT GCTTATCTGC AACGCTTGGA AGAGGCGGCG
AAACGCGACC ATCGTAAGAT TGGTAAGCAA CTCGATCTCT ACCACATGCA GGAAGAAGCA
CCAGGCATGG TGTTCTGGCA CAACGATGGT TGGACAATTT TCCGCGAATT GGAAACCTTT
GTGCGTATGA AGCTCAAAGA GTACCAGTAT CAGGAAGTGA AAGGTCCATT TATGATGGAT
CGCGTACTGT GGGAAAAAAC GGGGCATTGG GAAAACTACG CCGAGCATAT GTTCACGACC
TCTTCGGAGA ATCGTGAGTA CTGCATTAAG CCAATGAACT GCCCCGGACA CGTACAAATT
TTCAATCAAG GATTGAAATC TTACCGTGAC CTGCCGCTGC GTATGGCTGA ATTTGGTAGT
TGCCACCGTA ATGAACCTTC GGGCGCCCTA CATGGCTTAA TGCGTGTTCG TGGCTTTACT
CAAGATGATG CCCATGTCTT CTGTACCGAA GAGCAAGTCC GTGATGAAGT AAACAGTTGC
ATCAAGATGG TGTACGACAT GTACAGCACC TTTGGCTTCG AGAAGATTGT CGTCAAACTC
TCTACCCGCC CTGAAAAGCG TATTGGCAGT GATGAGTTAT GGACACGTGC CGAAGACGAT
TTGGCTGCTG CGCTGACTGA AAATGGTATT CCGTTTGATT ATCAGCCAGG CGAAGGGGCG
TTCTATGGCC CGAAAATTGA ATTTACCTTG CATGATTGTT TGGATCGTGC GTGGCAGTGT
GGTACCGTAC AGCTCGATTT CTCATTACCG GGCCGCTTAA GTGCGTCTTA CATCGGCGAA
AACAATGATC GTCAGGTGCC GGTAATGATT CACCGGGCAA TTTTGGGTTC AATGGAGCGC
TTCATCGGTA TCTTAACCGA AGAATATGCG GGCTTTTTCC CAACTTGGTT AGCTCCGGTA
CAAGTCGTGG TGATGAATAT CACCGATAGC CAGTCTGATT ATGTTCAGCA AGTAACCAAA
AAACTGCAAG ATGCGGGTAT TAGAGCAAAA GCAGACTTGA GAAATGAGAA GATTGGCTTT
AAAATTCGTG AACATACGTT GCGTCGGGTT CCATATATGT TGGTCTGTGG CGATAAAGAA
GTCGAATCAG GCAAAATTGC CGTTCGTACT CGCCGCGGTA AAGACTTAGG AAGTTTAGAC
GTCAACGTGG TCGTAGACCA GCTGCTAGCA GAAATTCGCA GCCGTAGTCT TCATCAACTG
GAGGAATAA
 
Protein sequence
MPVITLPDGS QRHYDHAVSV LDVALDIGPG LAKACIAGRV NGELVDASDL IESDAQLAII 
TAKDAEGLEI LRHSCAHLLG HAIKQLWPDT KMAIGPVIDN GFYYDVDIEH TLTQEDLALL
EKRMHELADK DYDVIKKKVS WQEARDTFAA RGEDYKVAIL DENISRDDRP GLYHHEEYVD
MCRGPHVPNM RFCHHFKLQK TSGAYWRGDS KNKMLQRIYG TAWGDKKQLN AYLQRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WTIFRELETF VRMKLKEYQY QEVKGPFMMD
RVLWEKTGHW ENYAEHMFTT SSENREYCIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGS
CHRNEPSGAL HGLMRVRGFT QDDAHVFCTE EQVRDEVNSC IKMVYDMYST FGFEKIVVKL
STRPEKRIGS DELWTRAEDD LAAALTENGI PFDYQPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDFSLP GRLSASYIGE NNDRQVPVMI HRAILGSMER FIGILTEEYA GFFPTWLAPV
QVVVMNITDS QSDYVQQVTK KLQDAGIRAK ADLRNEKIGF KIREHTLRRV PYMLVCGDKE
VESGKIAVRT RRGKDLGSLD VNVVVDQLLA EIRSRSLHQL EE