| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1703 |
|---|
| Symbol | yfeC |
|---|
| ID | 5387656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1974619 |
|---|
| End bp | 1975503 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640864684 |
|---|
| Product | chelated iron ABC transporter, permease protein YfeC |
|---|
| Protein accession | YP_001400680 |
|---|
| Protein GI | 153948520 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAC TTTTACTGCA ACCGTTTAAT TATAATTATA TGGTCAAGGC CATTTGGGTT
AGTGCGATTG TGGGGGCCGT TTGTGCTTTT CTATCCGCTT ATCTGATGCT AAAAGGCTGG
TCGCTGATGG GTGATGCGTT ATCACACTCA GTCGTGCCTG GGGTTGCAGG GGCTTATGCT
CTTGGTTTTC CCTATGCCGC TGGCGCTTTC TTTACGGGTA TGCTTGCCGC CTTGGCAATG
ACGCTAGTAC GCCACATTAC CCGCCTACGT GAAGATGCCA TTATCGGTTT TATCTTTTCT
ACCTTTTTTG CTGTTGGGCT TTTAATCGTT TCACTCAATC CCACATCAGT GAATGTTCAG
TCGATCATCT TCGGCAATAT TCTGGGTATT GCTGATGAAG ATGTCTTGCA GGTAGAAATC
ATTATTTTGG TTTCTTTTGT GATTTTATGT TTGATCTGGA AAGATTTATT AGCGGTGTTT
TTCGATGAAA GCCACGCCAT GTCAATTGGT TTATCCCCAC TGCGCTTAAA AATCTTATTC
TTTACGCTCC TGAGCGCCTG TACTGTCGCC GCTTTACAAA CCGTGGGGGC CATTTTAGTG
ATAGCTATGG TCGTCACTCC AGGGGCAACA GCCTATTTAC TGACCGATCG TTTCGGCCGC
TTGCTCATTA TTGCCATTGC TATTGGGGCC ATTACCAGTG CTTTCGGCGC GTATCTCAGT
TTTTATCTGG ATGGGGCAAC CGGTGGCGTT ATTGTCACCT TACAAACACT GGTATTCCTG
CTGGCCTTCT TCTTTGCCCC CAAACACGGA TTACTGGCAA CCCGATACCG CACACGGTTG
AAACGTCGTC ATCCGCCGGT TCATCTTCCG GAGGATAACC TATGA
|
|---|
| Protein sequence | MLELLLQPFN YNYMVKAIWV SAIVGAVCAF LSAYLMLKGW SLMGDALSHS VVPGVAGAYA
LGFPYAAGAF FTGMLAALAM TLVRHITRLR EDAIIGFIFS TFFAVGLLIV SLNPTSVNVQ
SIIFGNILGI ADEDVLQVEI IILVSFVILC LIWKDLLAVF FDESHAMSIG LSPLRLKILF
FTLLSACTVA ALQTVGAILV IAMVVTPGAT AYLLTDRFGR LLIIAIAIGA ITSAFGAYLS
FYLDGATGGV IVTLQTLVFL LAFFFAPKHG LLATRYRTRL KRRHPPVHLP EDNL
|
|---|
| |