Gene YpsIP31758_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1608 
SymbolphoP 
ID5384884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1867624 
End bp1868295 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID640864589 
ProductDNA-binding transcriptional regulator PhoP 
Protein accessionYP_001400585 
Protein GI153948628 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTC TGGTTGTGGA AGATAACGCG TTGTTGCGTC ACCATCTGAC AGTGCAAATG 
CGTGAAATGG GCCATCAGGT TGATGCAGCG GAAGATGCTA AAGAAGCAGA CTATTTCTTA
CAAGAGCATG CCCCCGACAT TGCTATTATC GATCTTGGTT TGCCCGGTGA AGACGGGTTA
AGCCTTATCC GTCGCTGGCG TAGCCATCAA GAAAACTTAC CCATTCTGGT ACTGACCGCA
CGGGAAAGCT GGCAAGATAA AGTCGCTGTA CTGGAAGCCG GTGCCGACGA TTATGTGACC
AAACCGTTCC ATCTGGAAGA GGTCATTGCC CGGATGCAAG CATTGATGCG GCGGAATATT
GGCTTGGCAT CCCAAATTAT TGAGCTACCC CCCTTCCAGA TTGACCTTTC ACGCCGTGAG
TTGTGTGTTA ACCAACAACA AATTAAACTG ACGGCATTTG AATACACTAT CATTGAAACC
CTTATCCGCA ACGCAGGGAA AGTCGTTAGT AAGGATACGT TGATGCTACA ACTTTATCCG
GATGCGGAAT TGCGAGAGAG CCATACTATC GATGTATTAA TGGGTCGACT ACGTAAAAAA
CTGCTGGCAG AACATCAGGG CGAAGTCATT ACGACTATTC GTGGTCAGGG ATATCGTTTT
GACGTCAACT AG
 
Protein sequence
MRVLVVEDNA LLRHHLTVQM REMGHQVDAA EDAKEADYFL QEHAPDIAII DLGLPGEDGL 
SLIRRWRSHQ ENLPILVLTA RESWQDKVAV LEAGADDYVT KPFHLEEVIA RMQALMRRNI
GLASQIIELP PFQIDLSRRE LCVNQQQIKL TAFEYTIIET LIRNAGKVVS KDTLMLQLYP
DAELRESHTI DVLMGRLRKK LLAEHQGEVI TTIRGQGYRF DVN