Gene YpsIP31758_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1597 
Symbol 
ID5385609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1853703 
End bp1854242 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID640864578 
Producthypothetical protein 
Protein accessionYP_001400574 
Protein GI153947095 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0188562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAT CAATGTTAGC CGGTGTGGGG ATTGGTATTG CCGCCGCTCT GGGAATTGCT 
GCAGTGGCGA ATATAGATGT CTTCTCCAGT GCACCACAAT ATGCCAAAGT GCTTACTGCA
ACCCCGATAA AAGAGACCAT CAAAACGCCT CGTCAAGAGT GCCGTAACGT GACAGTGACG
CACCGCAAAC CAGTACAAGA CGAAAATAAG ATCGCAGGCT CAGTTTTGGG TGCAGTCGCA
GGTGGGGTGT TGGGGCATCA GGTCGGTGGT GGCCGTGGTA AGGATATCGC TACCGTAGCG
GGTGCGTTAG CGGGAGGATA TGCAGGTAAT CGTGTGCAAA ATAATATGCA GGAAAATGAT
ACCTATACCA CAACCCAACA GCGTTGCCAG ACCGTGTATG ACAAATCACA GAAGACGCTG
GGATATGACG TAACCTACAA AATTGGCGAT CAGCAGGGAA AAATTCGTAT GGATCGTGAT
CCAGGTATGC AGATCCCCAT TGATAAAAAT GGTCAACTGG TGCTGAACAA CCGAGCGTAA
 
Protein sequence
MNKSMLAGVG IGIAAALGIA AVANIDVFSS APQYAKVLTA TPIKETIKTP RQECRNVTVT 
HRKPVQDENK IAGSVLGAVA GGVLGHQVGG GRGKDIATVA GALAGGYAGN RVQNNMQEND
TYTTTQQRCQ TVYDKSQKTL GYDVTYKIGD QQGKIRMDRD PGMQIPIDKN GQLVLNNRA