| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1590 |
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| Symbol | |
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| ID | 5387195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1846869 |
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| End bp | 1847444 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864571 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001400567 |
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| Protein GI | 153949542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.228931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGGT ATTTATCTCT GGCGCTGGCC GCACTGGTGC TGACGGGTTG CGTTCCTCCG
GATTCTGTCA CGCCGACGCC TCCAGTGACC ATTGAACCGG TAACGCCACC GGATGTTGAG
GTGCCACCGC CGGTAGATAC CGTTCCGCAG CCACCGAAAG TGCAGTCAAT TGACTGGGCT
GTCAGTGTTG AACCTCTGGT TGCCCAAATG GTGAACAGCG ATGAGGTAGC GACAGGTAGC
ATACTGTTGG TGGATTCGGT TAAAAATAAT ACTAATGGCG CATTGCAAAC AGCGAAAGCG
ACTGCTGCGT TGCATCAAGT CCTGTCATCA AATAAAAAGT TTGTGCTGAT CTCACCCCAG
CAACTGGGCG TCGCTAAACA GACGCTGGGG TTATCTGAGG AGGATAGCTT TGGCTCGCGC
AGTAAAGCGA TCGGTTTGGC CCGTTACGTC GGTGCGCAAT ATGTGCTGTA CAGTGATGTC
AGTGGCGATG TGAAATCTCC GACCATTGAA ATGCAATTGA TGCAGACACA AACCGGTGAA
ATCATTTGGT CTGGTAATGC GCCTGTCCAA TATTGA
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| Protein sequence | MKRYLSLALA ALVLTGCVPP DSVTPTPPVT IEPVTPPDVE VPPPVDTVPQ PPKVQSIDWA
VSVEPLVAQM VNSDEVATGS ILLVDSVKNN TNGALQTAKA TAALHQVLSS NKKFVLISPQ
QLGVAKQTLG LSEEDSFGSR SKAIGLARYV GAQYVLYSDV SGDVKSPTIE MQLMQTQTGE
IIWSGNAPVQ Y
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