Gene YpsIP31758_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1548 
Symbol 
ID5388562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1803534 
End bp1804460 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content45% 
IMG OID640864530 
Productintegral membrane protein 
Protein accessionYP_001400526 
Protein GI153949758 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCGCA GTCCTTCTCT TTTTACGAGT AAAAAGTTTG TCTTCTTCGG TGCAACCTTC 
TGTTGTCTAC TTTGGGGGAG TGCCTATCCA GCAATAAAAA ATGGCTATCA ATTGTTTAAT
ATTTCGCCTG ATGATATTCC CAGTAAGATG GTGTTTGCTG GATATCGTTT TTTATTAGCC
GGATTAGTAT TGCTGCTTTT TGCGCTCGCC AGTGGTAAGG CAATAGGGCG TCTTAAAAAG
GGACAATATC AGCAAATTGC TATTTTGGGA TTAACCCAAA CGGCGTTGCA GTATGTGTTT
TTTTATATCG GTTTGGCTTA CACCACTGGA GTGAAAGGTT CAATCATGAA TGCGACGGGG
ACATTCTTCA GTGTCCTGCT AGCACATTAC CTCTATAAAA ATGACCGGTT AACGTTGAAT
AAAATCATTG GCTGCGCACT GGGTTTTGTG GGGGTGATGG TGGTCAACGT GGGTTCAGAT
TTAATGGACT TCAATTTTTC GCTGCTCGGA GAGGGCTCGG TAGTATTAGC CGCATTTATT
CTCTCAGCGG CCAGTATTTA CGGTAAGCGC ATTTCGCAGA CGATGGATAC CACGGTGATG
ACCGGCTATC AGTTAGCGAT TGGTGGGTTG GTGTTAACCC TTGGGGGCTA TCTATTTGGT
GGGCATCTCA GTGATTTTGG CTGGCAAGCT TTGTTGCTAC TGGGATATCT GGTGCTGCTG
TCATCGGTCG CTTTCGCTCT TTGGAGCTTA TTACTTAAAT ATAATCGTGT CGGCATGGTG
GCACCGTTCA ACTTTTTAAT CCCGGTATCT GGTGCGGTTC TTTCTGCTAT CTTCTTGCAT
GAGAGTATTT TGGAGTGGAA GAATGCCATC GCGTTGGTCT TGGTCTGCGT CGGGATTGTG
TTGGTGAATA AAATTAAATC GACGTAG
 
Protein sequence
MDRSPSLFTS KKFVFFGATF CCLLWGSAYP AIKNGYQLFN ISPDDIPSKM VFAGYRFLLA 
GLVLLLFALA SGKAIGRLKK GQYQQIAILG LTQTALQYVF FYIGLAYTTG VKGSIMNATG
TFFSVLLAHY LYKNDRLTLN KIIGCALGFV GVMVVNVGSD LMDFNFSLLG EGSVVLAAFI
LSAASIYGKR ISQTMDTTVM TGYQLAIGGL VLTLGGYLFG GHLSDFGWQA LLLLGYLVLL
SSVAFALWSL LLKYNRVGMV APFNFLIPVS GAVLSAIFLH ESILEWKNAI ALVLVCVGIV
LVNKIKST