Gene YpsIP31758_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1542 
Symbol 
ID5384919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1797961 
End bp1798464 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID640864524 
Producthypothetical protein 
Protein accessionYP_001400520 
Protein GI153949450 
COG category[S] Function unknown 
COG ID[COG1795] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03126] formaldehyde-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGT ATATTGGCGA AGGTTTTGCA GGTAACGGGG TGAATGCCGC CCATATCAAT 
ATTATGATCG GCCCGCGCGA TGGTGTTGTC GGTCAGGCTT TCGCGGCCAG CCTTGCCTCT 
CCCAGTCAGG GGCATTGCCC TTTTATCGTC GTTATCAAGC CGAATGTAGC CGCCAAGCCG 
ATGACCCTGT ATGTCAACAA AGCCGAGATC CGCAGTGAAC TTCATGGCCG TGCAACTTGG 
GGAGCCTCCC AGGCTGCAGT TGCCAAAGCC GTCGCCGAAG CGTTATTGGC GAATCTTTTT 
CCCCCAGAGG CAGAGGACGA CTGGTGCATC ATTACCGCTA ATTGGGTGAA TATTGATTGT 
GACGATATTG ATGAGGTTTA TAGGAATAAC TATCGTGCCT GTACTACCGC CCTTCATGCA 
GCCATGGCAA AAACACCAAA ACGTGATCAA CTAACACATG CATTGACGCA ACTGAGCAAC 
CCCTTCTTTA CCCCCAAAGC CTGA
 
Protein sequence
MQMYIGEGFA GNGVNAAHIN IMIGPRDGVV GQAFAASLAS PSQGHCPFIV VIKPNVAAKP 
MTLYVNKAEI RSELHGRATW GASQAAVAKA VAEALLANLF PPEAEDDWCI ITANWVNIDC 
DDIDEVYRNN YRACTTALHA AMAKTPKRDQ LTHALTQLSN PFFTPKA