| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1495 |
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| Symbol | glnH |
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| ID | 5386416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1736594 |
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| End bp | 1737337 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640864477 |
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| Product | glutamine ABC transporter periplasmic protein |
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| Protein accession | YP_001400473 |
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| Protein GI | 153948725 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.000566563 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTCAC TTGTCAAAGT TTCATTGGCC GCACTGACAC TGGCCTTTGC TGTTAGCGCC
TACGCCGCAG AAAAAGAGTT AATTGTTGCT ACAGACACCG CTTTCGTCCC ATTTGAATTC
AAACAAGGGG ATAAATACGT TGGTTTTGAT ATCGATTTGT GGGATGCCAT CGCGAAAAAA
CTGGATCTGA AGTACACGCT AAAACCAATG GATTTCAGCG GTATCATTCC GGCGCTGCAA
ACGAAGAATG TCGATCTTGC ACTGGCGGGC ATTACTATCA CCGATGAGCG TAAAAAAGCC
GTTGATTTTT CTGATGGTTA TTACAACAGT GGCCTCTTGG TCATGGTAAA AGCGGATAAT
AATGACATTA AAAGTGAGGC CGACCTGCAA GGCAAAGTGT TAGCAGTAAA AAGCGGCACT
GGCTCGGTGG ATTACGCCAA AGCCAATATC AAGACCAAAG ACTTGCGCCA ATTCCCGAAT
ATCGATAACG CCTACCTGGA ATTAGGAACT GGCCGTGCAG ATGCGGTTTT ACATGATACG
CCGAATATTC TTTACTTCAT CAAAACCGCA GGTAATGGCC AGTTCAAAGC AGTAGGTGAG
TCGATTAAAG CTCAGCAGTA CGGTGTTGCA TTCCCGCAAG GCAGTGACCT GCGTGAAAAA
GTTAACGCGG CACTGAAATC TCTGAAAGAA GACGGCACTT ACGCTGAAAT CTATAAAAAA
TGGTTCGGCG TAGAACCTAA GTAA
|
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| Protein sequence | MKSLVKVSLA ALTLAFAVSA YAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKK
LDLKYTLKPM DFSGIIPALQ TKNVDLALAG ITITDERKKA VDFSDGYYNS GLLVMVKADN
NDIKSEADLQ GKVLAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYLELGT GRADAVLHDT
PNILYFIKTA GNGQFKAVGE SIKAQQYGVA FPQGSDLREK VNAALKSLKE DGTYAEIYKK
WFGVEPK
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