Gene YpsIP31758_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1472 
Symbol 
ID5387722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1712954 
End bp1714237 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content51% 
IMG OID640864454 
Productputative lipoprotein 
Protein accessionYP_001400450 
Protein GI153950804 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAC ATCTGAAAGG AAGCCACCGA TTCATTAGCC TGATGCTCTG CGCATTATTA 
CTCGCTGGCT GTGGACATCA GCGGATGCCA GAGAAACCCG TGAGTCCGGT AGGGAAAGAA
GAGCCGGTTC GTGGTGTCTG GCTAACCACC GTGCTCAGAC TTGACTGGCC TTCACTTTCA
TCGATTAACG CTAGCTCAGA CTCGATCAGG ATCAGCACGC AAAAGAAAGA ACTGACAGAC
ACATTAGATG ACTTGGTGAA AAACGGCGTC AACACCCTTT TCTTTCAAGT AAAGCCGGAT
GGGAGCGCGC TTTATCATTC AGCCATTCTT CCCTGGTCGG ATGTTTTGAC CGGTGTAACA
GGTCAGGATC CCGGTTATGA CCCTCTGGCC TTTGCGGTAT CTGAAGCACA TAAACGAGGG
CTTAAGATAC ACGCGTGGCT GAACCCCTAC CGTGTCTCAA TGGATACCCG GCCGGAAACG
AGTGCATCAC TTGAGCGCAC GCTCTCTTCT TCGCCAGCCA GTGTCTACGC GCTGCATAAA
GATTGGATAC GCACCGCCAA TGGCCGGTTT GTTCTCGATC CGGGGTTACC CGAGGTACGC
CACTGGATCA CCAATATTGT TGCCGAACTG GTCAAAAATT ATGACATCGA TGGCATACAG
TTTGATGATT ATTTCTATTA TGAAACCCCG TCATCCCGGC TTGATGATGA TGCCACATAC
CAGAAATATG GGCAGTCCTT CAGCGATAAG GCCAATTGGC GCAGGAACAA TACGTTGTTG
CTCATAAAAC AGGTCTCTTC AACCGTCAGG TCCCTTAAAC CAGAGATTGA GTTTGGTGTC
AGCCCGGCGG GCGTCTGGAG AAATCAGGCC GATGATCCCC TAGGGTCAGA GACACAGGCA
GGCAGCCCTT CTTACGATAC CGCATATGCC GATACCCGTT TATGGGTGCA GGACGGTTTA
CTGGATTATA TCGCACCACA ACTCTACTGG ACGCATAGCC AAAAAAAGGT CAAATATGAC
ACGCTGGCAA CATGGTGGGC AGATACCGTC AGGCATAGCC ACACCAAATT GTATATCGGC
GTCGCGTTAT ACAAGGTTGG CCAACCCTCG CAGGCCGAAT CTGACTGGGC ACTGGAAGGC
GGTGTGCCTG AGCTAAAGCG GCAACTGGAT CTCAATGACG CGCTGCCGGA AATCAGCGGA
ACGATTCTGT TCAGGGAAGC GTTTCTCCGT CAGCCCCAGA CGGAAGAGGC GGTGAAATAT
TTGAAGTCCA GGTGGCGTAA CTGA
 
Protein sequence
MLLHLKGSHR FISLMLCALL LAGCGHQRMP EKPVSPVGKE EPVRGVWLTT VLRLDWPSLS 
SINASSDSIR ISTQKKELTD TLDDLVKNGV NTLFFQVKPD GSALYHSAIL PWSDVLTGVT
GQDPGYDPLA FAVSEAHKRG LKIHAWLNPY RVSMDTRPET SASLERTLSS SPASVYALHK
DWIRTANGRF VLDPGLPEVR HWITNIVAEL VKNYDIDGIQ FDDYFYYETP SSRLDDDATY
QKYGQSFSDK ANWRRNNTLL LIKQVSSTVR SLKPEIEFGV SPAGVWRNQA DDPLGSETQA
GSPSYDTAYA DTRLWVQDGL LDYIAPQLYW THSQKKVKYD TLATWWADTV RHSHTKLYIG
VALYKVGQPS QAESDWALEG GVPELKRQLD LNDALPEISG TILFREAFLR QPQTEEAVKY
LKSRWRN