Gene YpsIP31758_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1441 
Symbol 
ID5385632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1678581 
End bp1679615 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content48% 
IMG OID640864424 
ProductLacI family sugar-binding transcriptional regulator 
Protein accessionYP_001400420 
Protein GI153947671 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.110495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TACGCAAGCG CCGTAATACC GGGCGGGTCA CGCTACAGGA AGTAGCCGAT 
TATGCTGGGG TAGGCTCGAT GACTGTTTCC CGAGCGCTAC GAACGCCGGA ACAGGTCTCA 
GATAAGTTAC GTGAGAAAAT AGAGCAAGCG GTTGAAAAAT TAGGCTACAT TCCAAACCGT 
GCCGCCGGTG CTTTAGCGTC AGGGCACAGC GATACCGTGG CGGTGTTGAT TCCGTCTTTA 
ACCGATAAAG CCAGCTCTCG GTTTATGCAG GCACTACAGC AAATTCTCAA TAAAAATGAA 
TTTCAGTTAT TGCTGGGTTG CCATGAATAC AATCAACGTA AAGAAGCTGA GATTCTCATG 
ACGTTACTGC AAAGCCACCC GGCGGCAGTG GTGATATTTG GCTCGCAGTT GGCGGATAAG 
ACATATCAGA TTCTTGAGCG CACCAATATT CCTATCGTTA ATGTTGTCGG CTCCTATTTT 
AAAGGGGCTA AAATTACCCT TGAAGCGGCT TTCTTTGAAT CGGCTTATGA ATTAACCCGT 
CACTTACTGG AGCGTGGCTA TCAACATATT GGCTATCTGG GGGCGCATCG GGATAATCAG 
TTGCAACGCC AGCAGCTCAA TGGATGGCAT AAGTCGATGC TCGAGCATTA CAAAAATGCT 
GACCAAACGG TCACCACGCC TGATGCGGCC AGCTTACAAT TTGGCCGTTA TGCCTTGACG 
GAGATCTTAC TGCGCCAGCC TGAATTAGAT GCAGTGATAT GCAGCCACGA AGATATTGCA 
CTTGGTGTGC TGTTTGAATG CCAGCGGCGG CTGCTTAAAA TCCCTGGTGG CATTGCGGTT 
GCTTGCCTGG ATGGCTCAGA GAGCTGTGAT CAAACTCATC CAACGCTGAC CTCAATGCGT 
ATCGATTATA AAAAAATGGG GAAAGAGGCC GGTAAGATGC TGATTGATAT GCTCAATGAG 
GATGATGCCG GAGTGAAAAG TGTGCCCCTC AGCCAAAGTT TTAACTATAA ATTTGAACCA 
CGGCAAAGTA CCTAA
 
Protein sequence
MEKIRKRRNT GRVTLQEVAD YAGVGSMTVS RALRTPEQVS DKLREKIEQA VEKLGYIPNR 
AAGALASGHS DTVAVLIPSL TDKASSRFMQ ALQQILNKNE FQLLLGCHEY NQRKEAEILM 
TLLQSHPAAV VIFGSQLADK TYQILERTNI PIVNVVGSYF KGAKITLEAA FFESAYELTR 
HLLERGYQHI GYLGAHRDNQ LQRQQLNGWH KSMLEHYKNA DQTVTTPDAA SLQFGRYALT 
EILLRQPELD AVICSHEDIA LGVLFECQRR LLKIPGGIAV ACLDGSESCD QTHPTLTSMR 
IDYKKMGKEA GKMLIDMLNE DDAGVKSVPL SQSFNYKFEP RQST