Gene YpsIP31758_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1339 
Symbol 
ID5388407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1567568 
End bp1568224 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content50% 
IMG OID640864321 
Productputative lipoprotein 
Protein accessionYP_001400318 
Protein GI153950519 
COG category[S] Function unknown 
COG ID[COG4380] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TTTTCGCCGT ATGTGCTGTC ATGATGGCGT TGCTACTGAC TGGGTGCGCC 
ACGCCAGTCG CGATGGATTA CACTGACTTT AAGCAAAGTA AACCCAAAAG CATTTTGGTG 
CTGTTGCCAC AAAATCAGTC GCCAGAAGTG GACGCCAGCC ATGGCGTACT GTCTCAAGTC 
ACTTATCCGT TGGCTGAAGC GGGCTACTAT GTGTTACCGG TGGCCGTGGT TGAAGAAACA 
TTTAAACAAA ATGGCATGAC CAACGCGGGT GATATTAGTG CGGCCAGCCC CGCCAAGTTG 
CGCCAAATCT TTGGTGCAGA TGCGGTGCTG TACATCACTA TCGTGCAATA CGGTACCTCT 
TATCAGGTCA TCACCAGCGA TACCCGCGTA ACCGCTAATG CGAAATTGGT TGATTTGAAA 
ACCGGTAAGC TGCTGTGGAG TGGCAGTGCA ACCGCATCCA GCAATGAGGG GAATAACTCT 
TCTGGCGGTG TTATCGGTCT ATTAGTGCAG GCTGCGGTCA GTCAGATTGC CAATACCATC 
ACAGATAAAA GCCATGATGT TGCCGGTATA ACCAGCGCCA GAATGCTTTC TGCAGGGACG 
CCTAATGGGC TTCTGTATGG CCCTCGTTCA CCGCAATACG GTAAAGATGG GAAATAA
 
Protein sequence
MKSIFAVCAV MMALLLTGCA TPVAMDYTDF KQSKPKSILV LLPQNQSPEV DASHGVLSQV 
TYPLAEAGYY VLPVAVVEET FKQNGMTNAG DISAASPAKL RQIFGADAVL YITIVQYGTS 
YQVITSDTRV TANAKLVDLK TGKLLWSGSA TASSNEGNNS SGGVIGLLVQ AAVSQIANTI 
TDKSHDVAGI TSARMLSAGT PNGLLYGPRS PQYGKDGK