Gene YpsIP31758_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1313 
SymbolcpxR1 
ID5387811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1538840 
End bp1539523 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID640864289 
Producttranscriptional regulatory protein CpxR 
Protein accessionYP_001400292 
Protein GI153947537 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.18695e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TGTTAGTCGA TGATGATCTT GAACTGGGCA CGATGTTGAA GGAATATTTG 
GGCGGAGAGG GGTTTACTGC CAAACATGTA TTGACCGGCA AAGCGGGCAT TGATGGAGCC
TTGTCCGGCG ATTACACCGC GCTTATCCTC GACATTATGT TGCCTGATAT GAGTGGCATT
GATGTATTAC GGCAAGTGCG GAAAAAAAGC CGTTTGCCGA TCATTATGTT AACGGCTAAA
GGCGACAATA TTGATCGGGT GATCGGTCTT GAAATGGGCG CGGATGACTA CATGCCTAAA
CCGTGCTATC CACGTGAATT GGTGGCTCGA TTACGCGCTG TTTTACGCCG TTTTGAAGAA
CAGCCAAACT TATCTGCCAC TGAGAGCAGT ATTATCACGC AAGGTGGATT GACACTTAAC
CCATCCACCC GCAGTAGCGA ATGGCAGGGT AAACCGTTTG ATCTGACCGC ATCGGAATTC
AATCTATTAG AGCTGCTGCT ACGTTCACCT GAACGCGTGG TGACTAAAGA CGAACTATCC
GATAAAGGGT TAGGGCGGCC TCGCGAAGCC TATGACCGTA GTGTTGATGT ACATATCAGT
AATATTCGCC AGAAACTCGC CGCCCTACCG GGTAATCATT TAAATATCGA AACGGTACGT
AGCATTGGCT ATCGCATCCG ATAA
 
Protein sequence
MKILLVDDDL ELGTMLKEYL GGEGFTAKHV LTGKAGIDGA LSGDYTALIL DIMLPDMSGI 
DVLRQVRKKS RLPIIMLTAK GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRFEE
QPNLSATESS IITQGGLTLN PSTRSSEWQG KPFDLTASEF NLLELLLRSP ERVVTKDELS
DKGLGRPREA YDRSVDVHIS NIRQKLAALP GNHLNIETVR SIGYRIR