| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1312 |
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| Symbol | |
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| ID | 5385730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1537447 |
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| End bp | 1538652 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864288 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001400291 |
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| Protein GI | 153950248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000000130358 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATG TTACTGGTTC AAAACGACGC CTTATCGGGT GGGTAGTTTT GCTACTGATC
ATCGGTGGCC TGCTATTCTT CAGATGGATT TCACCACCAG ATAAACCAAG CTATATCACC
GCCGTTGCTG AAATCCGCGA TCTGGAACAA ACAGTCTTAG CAGATGGCAC GATTAAAGCA
CAGAAGCAGG TGACTGTCGG TGCTCAGGTT TCAGGGCAAA TAAAAGCCCT TCATGTCACA
TTGGGGCAAC AAGTTGAAAA AAACCAATTA GTGGCTGAAA TTGATGATCT TGCTCAACAA
AATGCGCTGA AAGATGCGGA AGAGGCCCTG AAGAACGTGC AGGCTCAACG GGCGGCTAAA
ATCGCAACAC AAAAAAATAA CCAACTCACC TACCAGCGTC AGCAACAAAT TCTGGCAAAA
GGGGTTGGCG TACGTGCCGA TTTCGATAGC ATCAAGGCCA TCTTAGAAGC AACGCAAGCG
GAAATCAGTG CGTTGGATGC GCAGATAGCT CAGGCCGAAA TCGCCGTCAG TACGGCAAAA
CTTAATCTCG GCTATACCAA AATCAGTTCC CCCATTGCGG GCACCGTGGT TGCCATTCCG
GTTGAAGAGG GGCAAACCGT GAACGCCGTA CAAAGTGCGC CCACCATTAT CAAAGTCGCC
CAACTCGACA CCATGACTGT CGAAGCGCAG ATTTCCGAAG CCGATGTGGT CAAAGTCAAA
ACCGGGATGC CCGTCTATTT CACTATTTTA GGCGAACCAG AAAAACGTTT TAGTGCCACG
CTGCGGGCGA TAGAACCGGC CCCTGACTCG ATTAATGATG AAACCACAAC CACATCGTCA
TCAACTTCAA GTAGCAGTTC CAGCAGTACG GCTATTTATT ACAACGGCTT GTTTGATGTC
GCCAATCCGA CCGGTGCATT GCGTATCTCG ATGACCGCTC AGGTATATAT CCTGTTGAAT
CAAGCCAAAA ATGCGGTGGT TATTCCAGCA ACGGCATTGG AAAATGACCA AGGCCAATAT
CGGGTACAGG TGGTGGACAA CAGCGGTAAA GTCAGCCAAC GCACGGTGAC TGTGGGCCTC
AATAATAATG TGGATGCACA GATCCTCACC GGCCTGCAAG CCGGAGAGCA CGTGATTGTT
AGTCAGGGCA GCACCACCTC CACCAACAAT AAGGCCCCAC GTATGGGCCC ACCGATGGGG
ATGTAA
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| Protein sequence | MQHVTGSKRR LIGWVVLLLI IGGLLFFRWI SPPDKPSYIT AVAEIRDLEQ TVLADGTIKA
QKQVTVGAQV SGQIKALHVT LGQQVEKNQL VAEIDDLAQQ NALKDAEEAL KNVQAQRAAK
IATQKNNQLT YQRQQQILAK GVGVRADFDS IKAILEATQA EISALDAQIA QAEIAVSTAK
LNLGYTKISS PIAGTVVAIP VEEGQTVNAV QSAPTIIKVA QLDTMTVEAQ ISEADVVKVK
TGMPVYFTIL GEPEKRFSAT LRAIEPAPDS INDETTTTSS STSSSSSSST AIYYNGLFDV
ANPTGALRIS MTAQVYILLN QAKNAVVIPA TALENDQGQY RVQVVDNSGK VSQRTVTVGL
NNNVDAQILT GLQAGEHVIV SQGSTTSTNN KAPRMGPPMG M
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