| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1311 |
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| Symbol | |
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| ID | 5387394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1535407 |
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| End bp | 1537443 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640864287 |
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| Product | efflux ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_001400290 |
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| Protein GI | 153949894 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000105037 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGAC CACAACAAGG TAAAATTTTG CTCCGGCTCG AAAATGTCAG TCGTGAATTT
ATAACGGGCG AACAGACCGT CCGCGTGCTG AATAATATCA ATTTAACCCT CCACAGCGGA
GAAATGGTGG CGATTGTCGG CACATCCGGT TCAGGCAAAT CAACACTAAT GAATATTCTC
GGCTGTCTGG ATAAACCCAG CGCTGGTGAA TATTGGGTAG CGGGACGTAT CCCTCAGTAT
TTGGGCAGTG ATGCTCTCGC TGAACTGCGT CGCGAACACT TTGGCTTTAT TTTTCAGCGT
TACCACTTAC TGAACGATTT AAGTGCGCGC GAAAATGTCG AAATCCCAGC GATTTACGCA
GGCATTGATC GTGAAGAACG TCGTAAACGG GCGGTCAATC TGCTCTCACG TATTGGATTG
GCTGAACGGC TGGACTATCG GCCCAGCCAG CTCTCCGGGG GGCAACAGCA GCGGGTCAGT
ATCGCCAGGG CCTTGATGAA TGGCGGTGAC GTTATTCTGG CAGATGAACC TACTGGGGCG
CTTGACACCC ACAGCGGCAA CGAAGTCTTA AATATCCTTA AGGACTTGCA CCAACAGGGT
CATACCGTGG TGATTGTCAC CCACGATATG TCGATTGCAG AACATGCTCA ACGCATTATT
GAACTCAAAG ACGGCGAAAT TATCGCTGAT CGGCCAAGGG ATCACGCACA AGAAAAGCCA
AAAATGGTCG ATATCCCTTC TGTAATCGAT ATCCCTTCTA TGGACGAGAA AATATCTACG
GGAGCACAAC AAGAGACCGA AATTGCCCGC AAACCGCTCC TGACACGTTG GAAAGTACAG
TATGACCGCC TACACGAGGC GTTCAAAATG GCAATACTGG CGATGGCGGC ACAGCGCCTA
CGCACCGCCC TAACCATGCT AGGTATTATT ATTGGTATTG CATCGGTGGT CTCGGTCGTC
GCTCTGGGAA AAGGATCACA ACAACAGGTT CTGGCTAATA TCAATGCGAT GGGGACCAGT
ACACTGGAAA TTTTTCCCGG TAAAGATTTT GGCGATATGC GCTCCGCGGC GATCCATACT
TTGCGGGATA CCGATGCCGA TGTGCTGGCC CAGCAAGGGT ATATTCATAG CGTCACCCCT
ACCGTTTCGA CCAGCGTGAC ACTGCGCTAT GGCAATAAAT CGGTCAGTGG CACAGTGAAT
GGTGTGGGTG AGCAATATTT TTTGGTTCGC GGTTACACAA TAGCTCAGGG GATGGCATTT
ACCCGCACCA GTGTTAACGA CTTGATGCAA GAAGCCGTTA TTGACGAAAA CACCCGCGAT
AAACTCTTCC CCAACGGGGA AACGCCATTA GGGAAAGTGA TCCTGCTTGG TTCCCTGCCC
TGCCGGGTAA TTGGTGTAGC GGCCAAGAAA CAGAGCGGGT TTGGCAGTGA TGAAAATCTG
AATGTTTGGA TCCCTTATAC TACGGCGATG AAACGGATGC TCGGGCAATC CTATCTGAAA
AGTATCACGG TGCGAGTTAA CGATGATATT GATCTGGCGA ATGCGGAGCA AGGCGTGATC
AAGCTACTGA GCCAACGCCA CGGCACCCAA GATTTTTTCG TAATGAATAC GGACAGTATT
CGCCAGACCA TTCAAGCAAC CACATCAACG ATGACGTTGC TGGTATCCAT GATTGCGGTT
ATTTCATTGA TCGTCGGTGG TATTGGCGTG ATGAATATCA TGTTGGTCTC AGTGACCGAA
CGCACCAAAG AGATTGGTGT ACGCATGGCT GTCGGTGCAC GGGCCAGCGA TATTATGCAG
CAGTTTTTAA TTGAAGCTGT CTTGGTCTGT TTGCTAGGGG GTAGCCTCGG TGTCGCCTTA
TCGTTAGGGA TCGGGCTATT ATTCAGCCTG TTTAGCAGCA ACTTTTCAAT GGTTTACTCC
GCGGCCTCGA TTATTACCGC TTTTGTTTGT TCCAGCTTGA TTGGGGTCAT TTTTGGTTTC
TTCCCCGCGA AAAGAGCTGC GGAGATGGAC CCCATTAGGG CGTTAGAACG GGAGTAG
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| Protein sequence | MTGPQQGKIL LRLENVSREF ITGEQTVRVL NNINLTLHSG EMVAIVGTSG SGKSTLMNIL
GCLDKPSAGE YWVAGRIPQY LGSDALAELR REHFGFIFQR YHLLNDLSAR ENVEIPAIYA
GIDREERRKR AVNLLSRIGL AERLDYRPSQ LSGGQQQRVS IARALMNGGD VILADEPTGA
LDTHSGNEVL NILKDLHQQG HTVVIVTHDM SIAEHAQRII ELKDGEIIAD RPRDHAQEKP
KMVDIPSVID IPSMDEKIST GAQQETEIAR KPLLTRWKVQ YDRLHEAFKM AILAMAAQRL
RTALTMLGII IGIASVVSVV ALGKGSQQQV LANINAMGTS TLEIFPGKDF GDMRSAAIHT
LRDTDADVLA QQGYIHSVTP TVSTSVTLRY GNKSVSGTVN GVGEQYFLVR GYTIAQGMAF
TRTSVNDLMQ EAVIDENTRD KLFPNGETPL GKVILLGSLP CRVIGVAAKK QSGFGSDENL
NVWIPYTTAM KRMLGQSYLK SITVRVNDDI DLANAEQGVI KLLSQRHGTQ DFFVMNTDSI
RQTIQATTST MTLLVSMIAV ISLIVGGIGV MNIMLVSVTE RTKEIGVRMA VGARASDIMQ
QFLIEAVLVC LLGGSLGVAL SLGIGLLFSL FSSNFSMVYS AASIITAFVC SSLIGVIFGF
FPAKRAAEMD PIRALERE
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