Gene YpsIP31758_1167 details

Gene Information

• Locus tag: YpsIP31758_1167
• Symbol: iscR
• ID: 5386693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1372132
• End bp: 1372626
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640864144
• Product: DNA-binding transcriptional regulator IscR
• Protein accession: YP_001400148
• Protein GI: 153947579
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.000157606
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTGA CATCCAAAGG CCGCTATGCC GTAACCGCCA TGCTTGATGT GGCATTACAT 
TCCCAGGACG GGCCCGTTCC TCTGGCAGAT ATTTCGGAAC GTCAGGGGAT CTCGTTATCC 
TATCTGGAAC AACTTTTTTC ACGCCTACGT AAAAATGGCT TAGTCGCCAG CGTACGCGGC 
CCAGGCGGTG GTTATCTGCT GGGCAAAGAT GCATCAGCAA TCGCGGTTGG CGCGGTTATC 
ACTGCCGTTG ACGAATCCGT TGATGCAACC CGTTGTCAGG GTAAAGAAGG CTGTCAGGGC 
GGAAATCGCT GCCTGACACA TACCCTGTGG CGTGATTTGA GCGAGCGTAT CAGCAGCTTC 
CTCAACAATA TTACATTGGC AGAACTGGTT AATAACCAAG ATATCCTAGA GGTAGCGGAT 
CGTCAGAATA ACGATACGCG CCGCACGGCT AATGGCCGAC CGCAAGAGAC GATTAACGTC 
AATCTGCGCG CATAA 

 

Protein sequence

MRLTSKGRYA VTAMLDVALH SQDGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVASVRG 
PGGGYLLGKD ASAIAVGAVI TAVDESVDAT RCQGKEGCQG GNRCLTHTLW RDLSERISSF 
LNNITLAELV NNQDILEVAD RQNNDTRRTA NGRPQETINV NLRA