| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1158 |
|---|
| Symbol | glyA |
|---|
| ID | 5386636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1363224 |
|---|
| End bp | 1364477 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640864135 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001400139 |
|---|
| Protein GI | 153948354 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000000444868 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGC GTGAAATGAA CATTGCCGAT TACGATGCAG ATCTGTGGCG TGCAATGGAG
CAAGAAGTCG TGCGTCAGGA AGAACACATC GAACTGATTG CGTCTGAGAA CTACACCAGC
CCGCGTGTTA TGCAAGCGCA GGGATCTCAG TTAACGAACA AATATGCTGA AGGCTATCCA
GGCAAGCGTT ATTACGGTGG CTGTGAATAT GTTGATATTG TTGAACAATT AGCAATCGAT
CGTGCTAAAG CACTATTTGG TGCTGATTAC GCAAACGTTC AACCTCATTC TGGTTCACAA
GCTAACGTTG CTGTTTACTC TGCGTTGCTG AAACCCGGTG ACACCGTATT GGGGATGAAT
CTGGCACACG GCGGTCACTT GACGCATGGT TCACCAGTGA ACTTCTCCGG CAAACTCTAC
AACATCGTCC CTTATGGTAT TGATGAGTCG GGTCAAATTG ATTATGAAGA TCTGGCACGT
CAGGCGGAAA TACATAAACC AAAAATGATT ATCGGTGGCT TCTCTGCCTA TTCTGGTATC
GTTGATTGGG CAAAAATGCG TGAAATTGCC GACAGCATTG ACGCATGGTT CTTTGTTGAT
ATGGCTCACG TTGCTGGTCT GGTTGCTGCG GGTGTTTATC CTAACCCGGT TCCACATGCC
CACATCGTTA CCACCACGAC GCACAAGACT CTGGCTGGCC CACGTGGCGG TTTGATTCTG
GCGAAAGGGG GCGATGAAGA CTTGTACAAA AAACTGAACT CTTCTGTTTT CCCTGGTAAC
CAGGGTGGCC CATTGATGCA TGTTATCGCA GGTAAAGCGG TCGCGCTGAA AGAAGCAATG
GAACCTGAGT TTAAAATTTA CCAACAGCAA GTGGCTAAAA ATGCGAAAGC CATGGTGGCG
GTGTTCTTGG AGCGCGGTTA CAAAGTGGTT TCTGGTGGTA CGGATAACCA CCTGTTCTTG
CTAGATTTGG TGGATAAAGA CATCACCGGT AAAGACGCTG ATGCGGCTTT AGGCCGTGCG
AATATCACCG TGAACAAAAA CAGCGTACCT AACGATCCGA AGAGCCCGTT TGTGACATCT
GGTGTGCGTA TTGGTAGCCC AGCGATCACC CGCCGTGGCT TCAAAGAAGC GGAATCCCGT
GAATTGGCTG GCTGGATGTG TGATGTGTTA GATAACATCA ACGATGAAGC GACCATTGAG
CGTGTGAAAC AGAAAGTTCT GGCTATCTGC GCTCGTTTAC CGGTTTACGC ATAA
|
|---|
| Protein sequence | MLKREMNIAD YDADLWRAME QEVVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP
GKRYYGGCEY VDIVEQLAID RAKALFGADY ANVQPHSGSQ ANVAVYSALL KPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIVPYGIDES GQIDYEDLAR QAEIHKPKMI IGGFSAYSGI
VDWAKMREIA DSIDAWFFVD MAHVAGLVAA GVYPNPVPHA HIVTTTTHKT LAGPRGGLIL
AKGGDEDLYK KLNSSVFPGN QGGPLMHVIA GKAVALKEAM EPEFKIYQQQ VAKNAKAMVA
VFLERGYKVV SGGTDNHLFL LDLVDKDITG KDADAALGRA NITVNKNSVP NDPKSPFVTS
GVRIGSPAIT RRGFKEAESR ELAGWMCDVL DNINDEATIE RVKQKVLAIC ARLPVYA
|
|---|
| |