| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1157 |
|---|
| Symbol | hmp |
|---|
| ID | 5385043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1361493 |
|---|
| End bp | 1362683 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640864134 |
|---|
| Product | nitric oxide dioxygenase |
|---|
| Protein accession | YP_001400138 |
|---|
| Protein GI | 153949368 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1017] Hemoglobin-like flavoprotein
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0210523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATG CCCAAACCAT CGCTATCGTT AAGTCTACCA TTCCCTTGCT GGCTGCCACC
GGCCCCAAAC TGACAGCCCA TTTCTATGAG CGCATGTTTA AGCATCACCC TGAACTCAAA
CACATTTTTA ATATGAGTAA CCAATCGAGT GGTGATCAAC GCGAAGCCTT ATTTAATGCT
ATTTGTGCTT ATGCGACCAA TATCGAAAAT CTTGCGGCAC TACTCCCCAC GGTTGAACGT
ATTGCCCAAA AACATACCAG TTTAAATATT CAGCCAGAGC ATTACCCTAT TGTTGGTGAG
CATTTAATCG CTACCCTTGA TGAACTATTT TCACCCGGTC AGGCCGTTTT AGATGCCTGG
GCTAAAGCCT ATGGTGTCTT GGCTGATGTG TTTATTCAGC GTGAAAGCCA GATTTATCAG
CAAAGTGAGA CGGAAACCGG TGGTTGGAGA ACCTTACGCC GCTTCCGCAT TATAAAAAAA
GAGCAACAAA GCGAGGTAAT TTGCAGTTTT GTCTTGGCAC CGGAAGACGG CGGCCAAGTG
CTTCACTATA AACCGGGGCA ATATTTAGGC ATTTATATCG AGCATGAAAG CCTTGAATTC
CAAGAGATTC GTCAATATTC GCTGACCACC GCGCCCAATG GCAAAACTTA CCGTATTGCA
GTAAAACGTG AAGAACAAGG CACGGTTTCA AACTTACTGC ATCGGGAGTT AAATGAAGGG
GATATCGTGC GCATCGCACC ACCCCGTGGC GATTTCTTTT TGGATGTATC ACCAGATACC
CCGGTAGCAC TGATTTCTGC TGGGGTGGGC CAAACCCCGA TGCTCAGTAT GCTCAATACC
CTCTATAGCC AACAACATGC TGCCCCCGTA CATTGGTTAC ACGCAGCTGA AAATGGTCGT
GTACACGCAT TCGCTGATGA AGTTAGCGCT ATCGCAGCCA AGATGCCTAA TCTAAGCCGC
CATGTGTGGT ACCGCGAGCC AGACCTACAG GATAAACACG GCGAGGATTA CCATAGCCAA
GGGTTGATGG ATCTAAGTTC GTACCAGTGG CTAGCTGATG ATCCTAAACG ACATTATTAC
TTCTGTGGCC CGCTGCCATT TATGCAATTT ATAGGTCGTC AATTACTGGC CCAAGGGATA
GCACCTGAGC AGATTCACTA CGAATGCTTC GGTCCACATA AAGTCATTTA A
|
|---|
| Protein sequence | MLDAQTIAIV KSTIPLLAAT GPKLTAHFYE RMFKHHPELK HIFNMSNQSS GDQREALFNA
ICAYATNIEN LAALLPTVER IAQKHTSLNI QPEHYPIVGE HLIATLDELF SPGQAVLDAW
AKAYGVLADV FIQRESQIYQ QSETETGGWR TLRRFRIIKK EQQSEVICSF VLAPEDGGQV
LHYKPGQYLG IYIEHESLEF QEIRQYSLTT APNGKTYRIA VKREEQGTVS NLLHRELNEG
DIVRIAPPRG DFFLDVSPDT PVALISAGVG QTPMLSMLNT LYSQQHAAPV HWLHAAENGR
VHAFADEVSA IAAKMPNLSR HVWYREPDLQ DKHGEDYHSQ GLMDLSSYQW LADDPKRHYY
FCGPLPFMQF IGRQLLAQGI APEQIHYECF GPHKVI
|
|---|
| |