| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1138 |
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| Symbol | recO |
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| ID | 5388522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1339264 |
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| End bp | 1339989 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864114 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001400119 |
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| Protein GI | 153948747 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.146606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGGTT GGCAACGCGC ATTTGTTCTG CATGGGCGGC CTTACAGTGA AACCAGCTTA
ATGCTGGATT TATTTACTGA AGGGGAAGGG CGCATGCGGG TTCTGGCAAA AGGTGCGCGT
GGGCGTCGTT CCAATTTAAA AGGCTGCTTG CAGCCTTTTA CGCCGTTATT GGTTCGCTGG
TCAGGGCGTG GTGAAGTTAA AACATTACGC AGTGCGGAGC CAGTATCGCT GGCTCTTCCC
CTGAGCGGTT CTATGTTATA CAGCGGCTTA TATGTTAATG AGCTGCTTTC CCGCGTGTTA
GAGCACCAAA CCAGCTACTC AGCCCTATTC TTCGATTATC TGCACTGCTT ACAAGCGTTG
GCGGGGAGTG ATGGTTCACC TGAACATGCT TTACGTCAGT TTGAATTGGC GATGCTGGCG
AATCTGGGAT ATGGCGTCGA TTTTCTGCAT TGTGCCGGTA GCGGGCAGCC GGTATCCGAT
ACCATGACCT ATCGTTATCG GGAAGAGAAA GGCTTTATTG CCAGTCTGGT GGTCGATCAC
TACAGCTTTA CCGGCCGTCA ATTGTTAGCT TTAGCCAATC GAGAGTTTCC TGACGCCGAT
ACTTTGCGCG CGGCTAAACG TTTCACCCGT ATCGCCCTCA AACCTTATCT GGGCGGTAAA
CCTTTAAAGA GTCGCGAGCT ATTTCGTCAG TTTGTGATTA AGCCTCCAGC CGATCCTTCA
CCCTAG
|
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| Protein sequence | MDGWQRAFVL HGRPYSETSL MLDLFTEGEG RMRVLAKGAR GRRSNLKGCL QPFTPLLVRW
SGRGEVKTLR SAEPVSLALP LSGSMLYSGL YVNELLSRVL EHQTSYSALF FDYLHCLQAL
AGSDGSPEHA LRQFELAMLA NLGYGVDFLH CAGSGQPVSD TMTYRYREEK GFIASLVVDH
YSFTGRQLLA LANREFPDAD TLRAAKRFTR IALKPYLGGK PLKSRELFRQ FVIKPPADPS
P
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