Gene YpsIP31758_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1136 
Symbolrnc 
ID5384362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1337666 
End bp1338346 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content50% 
IMG OID640864112 
Productribonuclease III 
Protein accessionYP_001400117 
Protein GI153949383 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0329439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCCA TCGTAATAAA CAGGCTGCAG CGGAAGCTGG GCTACACTTT CCAACAGCAG 
GAGCTCTTGC TGCAAGCACT GACTCATCGT AGCGCCAGCA GCAAACACAA TGAGCGTTTG 
GAGTTCCTGG GTGACTCTAT ATTAAGTTTT GTTATCGCCA ATGAGCTATA TCGCCGTTTC 
CCTCGCGTTG ATGAAGGGGA TATGAGTCGT ATGCGGGCCA CATTGGTTAG AGGGAATACA 
CTTGCCGAAA TGGCCCGTGA ATTTGACCTT GGCGAATGTT TACGCCTTGG GCCGGGTGAA 
TTGAAGAGTG GTGGTTTTCG CCGCGAATCA ATTTTAGCCG ATACGGTAGA AGCCTTAATT 
GGCGGTGTAT TCTTAGATAG CGATATCCAT ACGATTGAAC GGCTGATCCT CGAGTGGTAT 
CACAGTCGGT TAGAGGAAAT CAGCCCTGGT GATAAGCAGA AAGACCCAAA AACGCGCTTG 
CAAGAGTATT TGCAGGGCCG TCATCTGCCA TTACCTTCAT ATCTGGTCGT GCAGGTTCGC 
GGCGAAGCAC ATGACCAGGA ATTTACTATC CACTGCCAGG TGAGTGGCTT GAATGAACCA 
GTAATAGGTA CTGGCTCAAG CCGTCGTAAA GCTGAGCAGG CGGCAGCGGA ACAAGCGCTG 
AAACAGTTGG AGCTTGAATG A
 
Protein sequence
MNPIVINRLQ RKLGYTFQQQ ELLLQALTHR SASSKHNERL EFLGDSILSF VIANELYRRF 
PRVDEGDMSR MRATLVRGNT LAEMAREFDL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGVFLDSDIH TIERLILEWY HSRLEEISPG DKQKDPKTRL QEYLQGRHLP LPSYLVVQVR 
GEAHDQEFTI HCQVSGLNEP VIGTGSSRRK AEQAAAEQAL KQLELE