Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1118 |
Symbol | |
ID | 5385411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1320107 |
End bp | 1320838 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864094 |
Product | hypothetical protein |
Protein accession | YP_001400099 |
Protein GI | 153947029 |
COG category | [S] Function unknown |
COG ID | [COG3819] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000146314 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAACAAA CGGTAAATCT TTGGCCGCTG ATCGGTATTG CGGCGATTGT AATTGGATTT TTATTGCGGA TAAACGCGGT ATTAGTGGTG ATCACCGCCG GGATTATTAC TGGTCTGGCC GCGTTGATGC CAATAGCCAC TATTTTAGAA AATCTGGGTC AGGGATTTCT TAACACCCGT AATCTGCCCT TGATTCTGTT ACTGCCCTTG GCGGTCATTG GTTTGCTTGA ACGTCATGGT TTGAAAGAGC GGGCGCAGGC ATGGATTATG CAAATTAAAA GTGCGACATC AGGTCGCTTA TTAATTGTTT ACCTCTTTGT GCGTGAAGTG ACGGCTGCTA TGGGGTTAAC CAGCCTTGGT GGTCACCCCC AGATGGTTCG GCCCTTATTG GCACCAATGG CTGAGGGGGC GGCAGAGAAC CGCTATGGCG AATTGCCGGA GAAAGTTCGC TACCGCCTGC GTGCCATGTC AGCGGCAACC GATAACGTGG GGTTGTTCTT TGGCGAGGAT ATCTTTGTCG CTTTCGGGGC GATTATCTTT ATGCACAACT TTATGTTGGA GTCGGGTGGC ATTCAGACGG AACCATTGCA TATCGCGCTG TGGGGGATCC CAACCGCGAT TTGTGCTTTC CTGATCCATG CCTACCGTTT ACAGCGGTTA GATAAACAAC TTGCTGCGGA ATTAACGGCG CTGAATCAGT CTGCCCTGGC AGCTCAGGGA GAGGCTAAAT GA
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Protein sequence | MEQTVNLWPL IGIAAIVIGF LLRINAVLVV ITAGIITGLA ALMPIATILE NLGQGFLNTR NLPLILLLPL AVIGLLERHG LKERAQAWIM QIKSATSGRL LIVYLFVREV TAAMGLTSLG GHPQMVRPLL APMAEGAAEN RYGELPEKVR YRLRAMSAAT DNVGLFFGED IFVAFGAIIF MHNFMLESGG IQTEPLHIAL WGIPTAICAF LIHAYRLQRL DKQLAAELTA LNQSALAAQG EAK
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