Gene YpsIP31758_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1118 
Symbol 
ID5385411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1320107 
End bp1320838 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID640864094 
Producthypothetical protein 
Protein accessionYP_001400099 
Protein GI153947029 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000146314 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAA CGGTAAATCT TTGGCCGCTG ATCGGTATTG CGGCGATTGT AATTGGATTT 
TTATTGCGGA TAAACGCGGT ATTAGTGGTG ATCACCGCCG GGATTATTAC TGGTCTGGCC
GCGTTGATGC CAATAGCCAC TATTTTAGAA AATCTGGGTC AGGGATTTCT TAACACCCGT
AATCTGCCCT TGATTCTGTT ACTGCCCTTG GCGGTCATTG GTTTGCTTGA ACGTCATGGT
TTGAAAGAGC GGGCGCAGGC ATGGATTATG CAAATTAAAA GTGCGACATC AGGTCGCTTA
TTAATTGTTT ACCTCTTTGT GCGTGAAGTG ACGGCTGCTA TGGGGTTAAC CAGCCTTGGT
GGTCACCCCC AGATGGTTCG GCCCTTATTG GCACCAATGG CTGAGGGGGC GGCAGAGAAC
CGCTATGGCG AATTGCCGGA GAAAGTTCGC TACCGCCTGC GTGCCATGTC AGCGGCAACC
GATAACGTGG GGTTGTTCTT TGGCGAGGAT ATCTTTGTCG CTTTCGGGGC GATTATCTTT
ATGCACAACT TTATGTTGGA GTCGGGTGGC ATTCAGACGG AACCATTGCA TATCGCGCTG
TGGGGGATCC CAACCGCGAT TTGTGCTTTC CTGATCCATG CCTACCGTTT ACAGCGGTTA
GATAAACAAC TTGCTGCGGA ATTAACGGCG CTGAATCAGT CTGCCCTGGC AGCTCAGGGA
GAGGCTAAAT GA
 
Protein sequence
MEQTVNLWPL IGIAAIVIGF LLRINAVLVV ITAGIITGLA ALMPIATILE NLGQGFLNTR 
NLPLILLLPL AVIGLLERHG LKERAQAWIM QIKSATSGRL LIVYLFVREV TAAMGLTSLG
GHPQMVRPLL APMAEGAAEN RYGELPEKVR YRLRAMSAAT DNVGLFFGED IFVAFGAIIF
MHNFMLESGG IQTEPLHIAL WGIPTAICAF LIHAYRLQRL DKQLAAELTA LNQSALAAQG
EAK