| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1115 |
|---|
| Symbol | |
|---|
| ID | 5384652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1317688 |
|---|
| End bp | 1318344 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640864091 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400096 |
|---|
| Protein GI | 153948894 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
|---|
| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000000190238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACGAG CACGATGCTA TTTACTGGGA GAGAGTGCGG TGGTGTTGGA GTTAGAACCA
CCGGTAACAT TAGCCAGCCA GCAACGGATT TGGGGCTTAG CTGATCGCCT AATTCATCAT
GCCGATATCC TTGAGGTGAT CCCTGGCATG AATAATTTAA CTCTACTGTT GGCCGATCCA
CACAATACTG CCTTAGATGC GATTGAGCGG TTACAACGTT GGTGGGAAGA GAGCGAGTCA
TTGATACCCG AATCGCGGGA TATCACCATC CCGGTAATGT ATGGCGGTGA AGTCGGTCCC
GATCTGGCTG ACGTTGCCCG TCATACGGGG ATGAGTGAAC GTCAGGTGGT TGAGTGCCAC
GCGGGCGCCC GTTATATCGT CTATTTTTTA GGCTTTCAAC CGGGGTTCTC TTATCTGGGA
GGGATGCCAG AGCAACTGGC TACACCACGG CGTGCAGATC CACGTTTAGT CGTTGCACCG
GGCTCGGTCG GGATTGGTGG CAGCCAAACG GGAATTTATC CCTTGGCAAC ACCGGGAGGG
TGGCAGTTAA TTGGTCGCAC TTCCCTGGCA CTGTTTAATC CAGTAGCGAT GCCACCGACC
TTATTGCGAC CTGGGGATAA TGTGCGCTTT CTGCCGCTAA AGGAGGGCGT ATGCTGA
|
|---|
| Protein sequence | MQRARCYLLG ESAVVLELEP PVTLASQQRI WGLADRLIHH ADILEVIPGM NNLTLLLADP
HNTALDAIER LQRWWEESES LIPESRDITI PVMYGGEVGP DLADVARHTG MSERQVVECH
AGARYIVYFL GFQPGFSYLG GMPEQLATPR RADPRLVVAP GSVGIGGSQT GIYPLATPGG
WQLIGRTSLA LFNPVAMPPT LLRPGDNVRF LPLKEGVC
|
|---|
| |