Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1112 |
Symbol | phrB |
ID | 5388180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1313691 |
End bp | 1315154 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864088 |
Product | deoxyribodipyrimidine photolyase |
Protein accession | YP_001400093 |
Protein GI | 153947154 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.196695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACGC ATCTGGTCTG GTTCCGCAAT GATTTACGGG TCACCGATAA TTTGGCGCTT CATGCGGCCT GTCAGGACCC ACAAGCGAGC GTAATTGCCG TGTTTATTGC CACACCCGTG CAATGGGCTG CACATGTTAT GGCACCCAGG CAGGCGGCTT TCCTGCGACA AAATTTACAA CATTTGCAGG CAGCTCTCTC GGCTCGAGGG ATACCGCTGC ATTATCACCA ATGTGATGAT TTTCAGGCGT CAAATACTTG GCTGGTCGAT TTTTGTCAGC AACAGCAGGT CGATAGCCTG TTTTATTCTC AACAGTATGA ACTGAACGAG CGGTTACGTG ACGATGCGCT GGCGGTGCAA CTCAGTGAGC GAGCTATCAC CTGCCAGTCT TTTCATGACA GTGTATTGCT CGCGCCGGGG ACGGTTCTGA CCGGTAATAA TGAAATGTAT AAAGTGTTTA CGCCTTTTCG CCGTGCGTTT ATTCAGCGTT TATTGATGAG TGATAACCAC TGTGTTCCAG CCCCGAAAGC CCGCCATGCT CCTCCCGTTC TGCTCTCACC GTTGCCTTTT GATTACCCAC AGCAGTCCGT TGATAGCCAG TTATTTCCTG CAGGGGAAGA CGCTGCCTTA CAGCGTTTAC GCCGTTTTTG TCGTGAACAG GTACAGGATT ACCGGCAATA CCGCGATTTG CCGGCGGTGC CCGGTACCAG TTGCTTATCC CCTTATTTGG TGTTGGGGGT CCTTTCACCG CGTCAATGTT TTAATCGCCT GTGGGCTGAA TCCCCAGAAA TGTTAGAGAA CGCAGACAGT GGTGCATTCA CTTGGCTTAA TGAGCTAATC TGGCGTGAGT TTTATCGCCA TTTATTAGTG GCCTATCCCC GTTTATGCCA ACATCATCCC TTTATTGGCT GGACTGATGG GTTAGTATGG AACCGATCTG AATCGCAATT GAAAGCCTGG CAGCAGGGGC AAACCGGTTA TCCCATCGTT GATGCCGCGA TGCGTCAAAT GAATGAAACT GGCTGGATGC ATAATCGCCT TCGCATGATC AGCGCCAGTT TTTTGGTTAA AGACCTGTTG ATCGACTGGC GGCAAGGTGA GCGTTATTTT ATGTCACAAT TGGTGGATGG GGACTTAGCC GCGAATAATG GCGGCTGGCA ATGGGCCGCA TCAACCGGTA CCGATGCCGC ACCGTATTTT CGTATTTTTA ATCCCACCAC GCAGGGCGAG CGGTTTGATA AGGACGGGGT ATTTATTCGT CGTTGGTTAC CGGAGCTGGC TGCGGTACCA GACAGTGATA TTCATCAGCC ATGGCGCTGG GCAGAACGGC AACAGCAGCA TCTGGATTAT CCTGTCCCGT TGGTTGATCA CAAGCAAGCC AGATTGGCTA CACTCGCGGC ATTTGAAGCC GCTAAGCGGG ATAGCACAAG GATCCCTAAT CGCAAGGAGC CTTCATGTTA TTGA
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Protein sequence | MSTHLVWFRN DLRVTDNLAL HAACQDPQAS VIAVFIATPV QWAAHVMAPR QAAFLRQNLQ HLQAALSARG IPLHYHQCDD FQASNTWLVD FCQQQQVDSL FYSQQYELNE RLRDDALAVQ LSERAITCQS FHDSVLLAPG TVLTGNNEMY KVFTPFRRAF IQRLLMSDNH CVPAPKARHA PPVLLSPLPF DYPQQSVDSQ LFPAGEDAAL QRLRRFCREQ VQDYRQYRDL PAVPGTSCLS PYLVLGVLSP RQCFNRLWAE SPEMLENADS GAFTWLNELI WREFYRHLLV AYPRLCQHHP FIGWTDGLVW NRSESQLKAW QQGQTGYPIV DAAMRQMNET GWMHNRLRMI SASFLVKDLL IDWRQGERYF MSQLVDGDLA ANNGGWQWAA STGTDAAPYF RIFNPTTQGE RFDKDGVFIR RWLPELAAVP DSDIHQPWRW AERQQQHLDY PVPLVDHKQA RLATLAAFEA AKRDSTRIPN RKEPSCY
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