Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1070 |
Symbol | |
ID | 5385449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1274650 |
End bp | 1274862 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640864046 |
Product | cold shock protein |
Protein accession | YP_001400051 |
Protein GI | 153949592 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00138821 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA AAATGACTGG TTTGGTAAAA TGGTTTGATG CTGGTAAAGG TTTTGGTTTT ATTTCTCCTG CAGACGGCAG CAAAGATGTA TTTGTACATT TCTCTGCAAT CCAGGGTAAT GACTACAAAA CTCTTGATGA AGGCCAGAAC GTTGAGTTCA GCATCGAGCA AGGCCAAAAA GGCCCTTCAG CTGTAAACGT TGTAGCACTG TAA
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Protein sequence | MSNKMTGLVK WFDAGKGFGF ISPADGSKDV FVHFSAIQGN DYKTLDEGQN VEFSIEQGQK GPSAVNVVAL
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