| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1055 |
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| Symbol | dnaQ |
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| ID | 5384734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1259633 |
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| End bp | 1260397 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640864030 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_001400036 |
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| Protein GI | 153948473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.328501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATTA CACCGACCAG ACAGATTGTT CTGGATACTG AAACTACCGG TATGAATAAG
CTTGGCGTTC ATTATGAAGG CCATCGTATT ATTGAAATCG GTGCCGTTGA AGTTATCAAC
CGCCGCCTGA CCGGCAGAAA TTTCCATGTA TATGTGAAGC CCGACCGTTT GGTTGATCCA
GAAGCTTACG GGGTTCACGG GATCAGCGAT GAGTTTTTGG CTGACAAGCC AACATTTGCT
GATATTACGC CGGAGTTTTT AGATTTTATC CGTGGCGCTG AATTAGTCAT CCATAATGCT
GCGTTTGATA TCGGCTTTAT GGATTACGAG TTCCGGATGT TGCAGCAAGA TATTCCGAAA
ACGGAGACCT TCTGTACTAT CACTGATAGC CTGTTGATGG CTCGCCGCTT ATTTCCCGGT
AAGCGGAATA ACCTTGATGC CCTGTGTGAT CGCTATCAGA TAGATAATAC CAAACGAACC
TTGCACGGTG CGTTACTTGA TGCCGAGATT CTGGCTGAAG TTTATTTAGC AATGACTGGC
GGGCAGACAT CGCTAACTTT CTCCATGGAA GGCGAAGTGT CGCAGAATAA CGCGTCTGAA
GATATTCAAC GCATTACTCG CCCAGCATCG GCATTGAAAA TTATCTATGC TACCGAGGAT
GAATTGGCTA ATCATGAATC CCGTTTGGAT TTTGTGATGA AAAAGGGCGG CAGTTGCCTG
TGGCGGATGC CGCTTGAGGC AGAAGAAGAG ACAAAAGCAG AATAA
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| Protein sequence | MIITPTRQIV LDTETTGMNK LGVHYEGHRI IEIGAVEVIN RRLTGRNFHV YVKPDRLVDP
EAYGVHGISD EFLADKPTFA DITPEFLDFI RGAELVIHNA AFDIGFMDYE FRMLQQDIPK
TETFCTITDS LLMARRLFPG KRNNLDALCD RYQIDNTKRT LHGALLDAEI LAEVYLAMTG
GQTSLTFSME GEVSQNNASE DIQRITRPAS ALKIIYATED ELANHESRLD FVMKKGGSCL
WRMPLEAEEE TKAE
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